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Drug resistance and vaccine target surveillance of Plasmodium falciparum using nanopore sequencing in Ghana Nat. Microbiol. (IF 28.3) Pub Date : 2023-11-23 Sophia T. Girgis, Edem Adika, Felix E. Nenyewodey, Dodzi K. Senoo Jnr, Joyce M. Ngoi, Kukua Bandoh, Oliver Lorenz, Guus van de Steeg, Alexandria J. R. Harrott, Sebastian Nsoh, Kim Judge, Richard D. Pearson, Jacob Almagro-Garcia, Samirah Saiid, Solomon Atampah, Enock K. Amoako, Collins M. Morang’a, Victor Asoala, Elrmion S. Adjei, William Burden, William Roberts-Sengier, Eleanor Drury, Megan L. Pierce
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Metabolic exchanges are ubiquitous in natural microbial communities Nat. Microbiol. (IF 28.3) Pub Date : 2023-11-23 Christian Kost, Kiran Raosaheb Patil, Jonathan Friedman, Sarahi L. Garcia, Markus Ralser
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A geometry-based approach to make viable-cell counting easy and cheap Nat. Microbiol. (IF 28.3) Pub Date : 2023-11-22
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Simultaneous spatiotemporal transcriptomics and microscopy of Bacillus subtilis swarm development reveal cooperation across generations Nat. Microbiol. (IF 28.3) Pub Date : 2023-11-16 Hannah Jeckel, Kazuki Nosho, Konstantin Neuhaus, Alasdair D. Hastewell, Dominic J. Skinner, Dibya Saha, Niklas Netter, Nicole Paczia, Jörn Dunkel, Knut Drescher
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Multiple micronutrient deficiencies in early life cause multi-kingdom alterations in the gut microbiome and intrinsic antibiotic resistance genes in mice Nat. Microbiol. (IF 28.3) Pub Date : 2023-11-16 Paula T. Littlejohn, Avril Metcalfe-Roach, Erick Cardenas Poire, Ravi Holani, Haggai Bar-Yoseph, Yiyun M. Fan, Sarah E. Woodward, B. Brett Finlay
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Obligate biotroph downy mildew consistently induces near-identical protective microbiomes in Arabidopsis thaliana Nat. Microbiol. (IF 28.3) Pub Date : 2023-11-16 Pim Goossens, Jelle Spooren, Kim C. M. Baremans, Annemiek Andel, Dmitry Lapin, Nakisa Echobardo, Corné M. J. Pieterse, Guido Van den Ackerveken, Roeland L. Berendsen
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Above- and belowground fungal biodiversity of Populus trees on a continental scale Nat. Microbiol. (IF 28.3) Pub Date : 2023-11-16 Michael E. Van Nuland, S. Caroline Daws, Joseph K. Bailey, Jennifer A. Schweitzer, Posy E. Busby, Kabir G. Peay
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Systematic mining of the human microbiome identifies antimicrobial peptides with diverse activity spectra Nat. Microbiol. (IF 28.3) Pub Date : 2023-11-16 Andrew M. King, Zhengan Zhang, Emerson Glassey, Piro Siuti, Jon Clardy, Christopher A. Voigt
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Immune imprinting and next-generation coronavirus vaccines Nat. Microbiol. (IF 28.3) Pub Date : 2023-11-06 Chloe Qingzhou Huang, Sneha Vishwanath, George William Carnell, Andrew Chun Yue Chan, Jonathan Luke Heeney
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A high-throughput and low-waste viability assay for microbes Nat. Microbiol. (IF 28.3) Pub Date : 2023-11-02 Christian T. Meyer, Grace K. Lynch, Dana F. Stamo, Eugene J. Miller, Anushree Chatterjee, Joel M. Kralj
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Time to tackle AMR together Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-30
As resistance against antimicrobials continues to grow, collective action must be taken to turn the tide against this global public-health concern.
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The Isala project’s empowered new insights into the vaginal microbiome and women’s health Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-26
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Arbuscular mycorrhizal fungi heterokaryons have two nuclear populations with distinct roles in host–plant interactions Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-26 Jana Sperschneider, Gokalp Yildirir, Yanina S. Rizzi, Mathu Malar C, Ariane Mayrand Nicol, Essam Sorwar, Matthew Villeneuve-Laroche, Eric C. H. Chen, Wataru Iwasaki, Elizabeth K. Brauer, Whynn Bosnich, Caroline Gutjahr, Nicolas Corradi
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A citizen-science-enabled catalogue of the vaginal microbiome and associated factors Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-26 Sarah Lebeer, Sarah Ahannach, Thies Gehrmann, Stijn Wittouck, Tom Eilers, Eline Oerlemans, Sandra Condori, Jelle Dillen, Irina Spacova, Leonore Vander Donck, Caroline Masquillier, Camille Nina Allonsius, Peter A. Bron, Wannes Van Beeck, Charlotte De Backer, Gilbert Donders, Veronique Verhoeven
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Nuclear exchange generates population diversity in the wheat leaf rust pathogen Puccinia triticina Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-26 Jana Sperschneider, Tim Hewitt, David C. Lewis, Sambasivam Periyannan, Andrew W. Milgate, Lee T. Hickey, Rohit Mago, Peter N. Dodds, Melania Figueroa
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DNA-binding protein PfAP2-P regulates parasite pathogenesis during malaria parasite blood stages Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-26 Amit Kumar Subudhi, Judith L. Green, Rohit Satyam, Rahul P. Salunke, Todd Lenz, Muhammad Shuaib, Ioannis Isaioglou, Steven Abel, Mohit Gupta, Luke Esau, Tobias Mourier, Raushan Nugmanova, Sara Mfarrej, Rupali Shivapurkar, Zenaida Stead, Fathia Ben Rached, Yogesh Ostwal, Rachid Sougrat, Ashraf Dada, Abdullah Fuaad Kadamany, Wolfgang Fischle, Jasmeen Merzaban, Ellen Knuepfer, David J. P. Ferguson, Ishaan
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Human skin organoids are valid models of mpox virus infection Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-19
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Iron-limitation light switch Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-19 Oded Béjà, Keiichi Inoue
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Turning the tide against antimicrobial resistance in Africa Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-19
Jimmy Nkaiwuatei is the Head of Research, Discovery and Innovations at Students Against Superbugs Africa, a youth-led organization tackling the problem of antimicrobial resistance through education and outreach in Africa.
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Bacterial histones unveiled Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-19 Bibhusita Pani, Evgeny Nudler
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Pleiotropic prebiotic for liver disease Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-16 Herbert Tilg, Heinz Zoller
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Bifidobacteria metabolize lactulose to optimize gut metabolites and prevent systemic infection in patients with liver disease Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-16 Matthew A. Odenwald, Huaiying Lin, Christopher Lehmann, Nicholas P. Dylla, Cody G. Cole, Jake D. Mostad, Téa E. Pappas, Ramanujam Ramaswamy, Angelica Moran, Alan L. Hutchison, Matthew R. Stutz, Mark Dela Cruz, Emerald Adler, Jaye Boissiere, Maryam Khalid, Jackelyn Cantoral, Fidel Haro, Rita A. Oliveira, Emily Waligurski, Thomas G. Cotter, Samuel H. Light, Kathleen G. Beavis, Anitha Sundararajan, Ashley
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Plastid-localized xanthorhodopsin increases diatom biomass and ecosystem productivity in iron-limited surface oceans Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-16 Jan Strauss, Longji Deng, Shiqiang Gao, Andrew Toseland, Charles Bachy, Chong Zhang, Amy Kirkham, Amanda Hopes, Robert Utting, Eike F. Joest, Alessandro Tagliabue, Christian Löw, Alexandra Z. Worden, Georg Nagel, Thomas Mock
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SARS-CoV-2 evolution in the Omicron era Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-16 Cornelius Roemer, Daniel J. Sheward, Ryan Hisner, Federico Gueli, Hitoshi Sakaguchi, Nicholas Frohberg, Josette Schoenmakers, Kenta Sato, Áine O’Toole, Andrew Rambaut, Oliver G. Pybus, Christopher Ruis, Ben Murrell, Thomas P. Peacock
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Genome-wide chromatin interaction map for Trypanosoma cruzi Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-12 Florencia Díaz-Viraqué, María Laura Chiribao, María Gabriela Libisch, Carlos Robello
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Mpox virus infection and drug treatment modelled in human skin organoids Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-12 Pengfei Li, Spyridon T. Pachis, Guige Xu, Rick Schraauwen, Roberto Incitti, Annemarie C. de Vries, Marco J. Bruno, Maikel P. Peppelenbosch, Intikhab Alam, Karine Raymond, Qiuwei Pan
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Adipocyte lipolysis protects mice against Trypanosoma brucei infection Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-12 Henrique Machado, Peter Hofer, Rudolf Zechner, Terry K. Smith, Luísa M. Figueiredo
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A genomics approach provides insight into the mode of action of biocides Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-09
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Systematic analyses identify modes of action of ten clinically relevant biocides and antibiotic antagonism in Acinetobacter baumannii Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-09 Liping Li, Francesca L. Short, Karl A. Hassan, Varsha Naidu, Alaska Pokhrel, Stephanie S. Nagy, Farzana T. Prity, Bhumika S. Shah, Nusrat Afrin, Stephen Baker, Julian Parkhill, Amy K. Cain, Ian T. Paulsen
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Intravenous Bacille Calmette–Guérin vaccination protects simian immunodeficiency virus-infected macaques from tuberculosis Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-09 Erica C. Larson, Amy L. Ellis-Connell, Mark A. Rodgers, Abigail K. Gubernat, Janelle L. Gleim, Ryan V. Moriarty, Alexis J. Balgeman, Cassaundra L. Ameel, Solomon Jauro, Jaime A. Tomko, Kara B. Kracinovsky, Pauline Maiello, H. Jake Borish, Alexander G. White, Edwin Klein, Allison N. Bucsan, Patricia A. Darrah, Robert A. Seder, Mario Roederer, Philana Ling Lin, JoAnne L. Flynn, Shelby L. O’Connor, Charles
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Antiviral responses are shaped by heterogeneity in viral replication dynamics Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-09 Lucas J. M. Bruurs, Micha Müller, Jelle G. Schipper, Huib H. Rabouw, Sanne Boersma, Frank J. M. van Kuppeveld, Marvin E. Tanenbaum
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Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-09 Antoine Hocher, Shawn P. Laursen, Paul Radford, Jess Tyson, Carey Lambert, Kathryn M. Stevens, Alex Montoya, Pavel V. Shliaha, Mathieu Picardeau, R. Elizabeth Sockett, Karolin Luger, Tobias Warnecke
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Author Correction: Drought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-06 Linnea K. Honeker, Giovanni Pugliese, Johannes Ingrisch, Jane Fudyma, Juliana Gil-Loaiza, Elizabeth Carpenter, Esther Singer, Gina Hildebrand, Lingling Shi, David W. Hoyt, Rosalie K. Chu, Jason Toyoda, Jordan E. Krechmer, Megan S. Claflin, Christian Ayala-Ortiz, Viviana Freire-Zapata, Eva Y. Pfannerstill, L. Erik Daber, Kathiravan Meeran, Michaela A. Dippold, Jürgen Kreuzwieser, Jonathan Williams,
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Using autopsies to dissect COVID-19 pathogenesis Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-05 Fabian Heinrich, Kirsten D. Mertz, Markus Glatzel, Martin Beer, Susanne Krasemann
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Life history strategies of soil bacterial communities across global terrestrial biomes Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-05 Gabin Piton, Steven D. Allison, Mohammad Bahram, Falk Hildebrand, Jennifer B. H. Martiny, Kathleen K. Treseder, Adam C. Martiny
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Challenges and opportunities in sharing microbiome data and analyses Nat. Microbiol. (IF 28.3) Pub Date : 2023-10-02 Curtis Huttenhower, Robert D. Finn, Alice Carolyn McHardy
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Better training for non-academic careers Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-28
As more PhD students and postdoctoral fellows transition to professions outside academia, training programmes must prepare scientists for these alternative careers.
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Understanding antimicrobial resistance to manage cholera Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-28 Agila Kumari Pragasam, Veeraraghavan Balaji, Ankur Mutreja
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Genomic epidemiology reveals multidrug resistant plasmid spread between Vibrio cholerae lineages in Yemen Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-28 Florent Lassalle, Salah Al-Shalali, Mukhtar Al-Hakimi, Elisabeth Njamkepo, Ismail Mahat Bashir, Matthew J. Dorman, Jean Rauzier, Grace A. Blackwell, Alyce Taylor-Brown, Mathew A. Beale, Adrián Cazares, Ali Abdullah Al-Somainy, Anas Al-Mahbashi, Khaled Almoayed, Mohammed Aldawla, Abdulelah Al-Harazi, Marie-Laure Quilici, François-Xavier Weill, Ghulam Dhabaan, Nicholas R. Thomson
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Systematic analysis of drug combinations against Gram-positive bacteria Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-28 Elisabetta Cacace, Vladislav Kim, Vallo Varik, Michael Knopp, Manuela Tietgen, Amber Brauer-Nikonow, Kemal Inecik, André Mateus, Alessio Milanese, Marita Torrissen Mårli, Karin Mitosch, Joel Selkrig, Ana Rita Brochado, Oscar P. Kuipers, Morten Kjos, Georg Zeller, Mikhail M. Savitski, Stephan Göttig, Wolfgang Huber, Athanasios Typas
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Microbiome ownership for Indigenous peoples Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-28 Matilda Handsley-Davis, Matthew Z. Anderson, Alyssa C. Bader, Hanareia Ehau-Taumaunu, Keolu Fox, Emma Kowal, Laura S. Weyrich
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A relational framework for microbiome research with Indigenous communities Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-28 Alyssa C. Bader, Essie M. Van Zuylen, Matilda Handsley-Davis, Rosanna A. Alegado, Amber Benezra, Rebecca M. Pollet, Hanareia Ehau-Taumaunu, Laura S. Weyrich, Matthew Z. Anderson
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Zoonotic potential of a pangolin coronavirus Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-25 Woo-Jin Shin, Seokmin Kang, Jae U. Jung
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A compendium of viruses from methanogenic archaea reveals their diversity and adaptations to the gut environment Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-25 Sofia Medvedeva, Guillaume Borrel, Mart Krupovic, Simonetta Gribaldo
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Host range, transmissibility and antigenicity of a pangolin coronavirus Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-25 Yixuan J. Hou, Shiho Chiba, Sarah R. Leist, Rita M. Meganck, David R. Martinez, Alexandra Schäfer, Nicholas J. Catanzaro, Vishwaraj Sontake, Ande West, Catlin E. Edwards, Boyd Yount, Rhianna E. Lee, Samuel C. Gallant, Seth J. Zost, John Powers, Lily Adams, Edgar F. Kong, Melissa Mattocks, Aleksandra Tata, Scott H. Randell, Purushothama R. Tata, Peter Halfmann, James E. Crowe, Yoshihiro Kawaoka, Ralph
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Nanopore-sequencing-based method for rapid poliovirus detection during outbreaks Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-18
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A mucin-foraging bacterium modulates breakdown of oral tolerance Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-15
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Microsporidian spores contain hibernating dimeric ribosomes Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-14 Elizabeth Weyer, Louis M. Weiss
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CryoEM reveals that ribosomes in microsporidian spores are locked in a dimeric hibernating state Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-14 Mathew McLaren, Rebecca Conners, Michail N. Isupov, Patricia Gil-Díez, Lavinia Gambelli, Vicki A. M. Gold, Andreas Walter, Sean R. Connell, Bryony Williams, Bertram Daum
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Akkermansia muciniphila exacerbates food allergy in fibre-deprived mice Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-11 Amy Parrish, Marie Boudaud, Erica T. Grant, Stéphanie Willieme, Mareike Neumann, Mathis Wolter, Sophie Z. Craig, Alessandro De Sciscio, Antonio Cosma, Oliver Hunewald, Markus Ollert, Mahesh S. Desai
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Cyclic-di-GMP promotes bacteria–host association Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-07 Tory A. Hendry, Kelley A. Gallagher
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Constraints on microbial metabolic complexity Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-07 Zeqian Li, Vaibhhav Sinha, Seppe Kuehn
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Eukaryotic-like gephyrin and cognate membrane receptor coordinate corynebacterial cell division and polar elongation Nat. Microbiol. (IF 28.3) Pub Date : 2023-09-07 Mariano Martinez, Julienne Petit, Alejandro Leyva, Adrià Sogues, Daniela Megrian, Azalia Rodriguez, Quentin Gaday, Mathildeb Ben Assaya, Maria Magdalena Portela, Ahmed Haouz, Adrien Ducret, Christophe Grangeasse, Pedro M. Alzari, Rosario Durán, Anne Marie Wehenkel
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Genome content predicts the carbon catabolic preferences of heterotrophic bacteria Nat. Microbiol. (IF 28.3) Pub Date : 2023-08-31 Matti Gralka, Shaul Pollak, Otto X. Cordero
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Single-cell massively-parallel multiplexed microbial sequencing (M3-seq) identifies rare bacterial populations and profiles phage infection Nat. Microbiol. (IF 28.3) Pub Date : 2023-08-31 Bruce Wang, Aaron E. Lin, Jiayi Yuan, Katherine E. Novak, Matthias D. Koch, Ned S. Wingreen, Britt Adamson, Zemer Gitai
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Bacterial c-di-GMP has a key role in establishing host–microbe symbiosis Nat. Microbiol. (IF 28.3) Pub Date : 2023-08-31 Nancy Obeng, Anna Czerwinski, Daniel Schütz, Jan Michels, Jan Leipert, Florence Bansept, María J. García García, Thekla Schultheiß, Melinda Kemlein, Janina Fuß, Andreas Tholey, Arne Traulsen, Holger Sondermann, Hinrich Schulenburg
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How do we solve a problem like tuberculosis? Nat. Microbiol. (IF 28.3) Pub Date : 2023-08-30
Investment in a new tuberculosis vaccine is a landmark step forward, but continued efforts to advance treatments, diagnostics and biosocial issues are needed to meet targets to end the epidemic by 2035.
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Advocating a watch-and-prepare approach with avian influenza Nat. Microbiol. (IF 28.3) Pub Date : 2023-08-28 Kevin Ciminski, Geoffrey Chase, Martin Schwemmle, Martin Beer
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Parkinson’s disease kinase LRRK2 coordinates a cell-intrinsic itaconate-dependent defence pathway against intracellular Salmonella Nat. Microbiol. (IF 28.3) Pub Date : 2023-08-28 Huan Lian, Donghyun Park, Meixin Chen, Florian Schueder, Maria Lara-Tejero, Jun Liu, Jorge E. Galán
更新日期：2023-11-25
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