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Author Correction: Distinct chemical environments in biomolecular condensates. Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-12-01 Henry R Kilgore,Peter G Mikhael,Kalon J Overholt,Ann Boija,Nancy M Hannett,Catherine Van Dongen,Tong Ihn Lee,Young-Tae Chang,Regina Barzilay,Richard A Young
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Publisher Correction: Modifying proteins with RNA. Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-12-01 Yiyun Song
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Accelerating the design of pili-enabled living materials using an integrative technological workflow Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-27 Yuanyuan Huang, Yanfei Wu, Han Hu, Bangzhuo Tong, Jie Wang, Siyu Zhang, Yanyi Wang, Jicong Zhang, Yue Yin, Shengkun Dai, Wenjuan Zhao, Bolin An, Jiahua Pu, Yaomin Wang, Chao Peng, Nan Li, Jiahai Zhou, Yan Tan, Chao Zhong
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RNA-based anti-CRISPRs Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-22 Yiyun Song
Using a type I-F SRU as an example, Camara-Wilpert et al. demonstrate that SRUs inhibit CRISPR–Cas immunity via an RNA-based anti-CRISPR mechanism. The type I-F SRU produced a small non-coding RNA (Racr) that mimicked the type I-F CRISPR RNA but resulted in the formation of an aberrant Cas subcomplex that lacked Cas5f and Cas8f, which are essential for target recognition and cleavage. Moreover, the
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Metagenomic domain substitution for the high-throughput modification of nonribosomal peptides Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-23 Sarah R. Messenger, Edward M. R. McGuinniety, Luke J. Stevenson, Jeremy G. Owen, Gregory L. Challis, David F. Ackerley, Mark J. Calcott
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Survival of the sweetest tooth Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-22 Gene Chong
The development of multidrug resistance in bacteria is a global public health concern, and the genetic and molecular determinants that enable multidrug resistance need to be resolved. It is notable, however, that multidrug resistance is not uniform across all strains of Escherichia coli and is instead concentrated in specific lineages, such as ST131. In an effort to understand this, Connor et al. have
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Traffic control Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-22 Grant Miura
Lysosomal degradation of extracellular and membrane proteins can be facilitated by lysosome-targeted chimeras (LYTACs). LYTACs are bifunctional compounds composed of a small molecule or antibody that recognizes a protein of interest linked to a peptide that directs the chimera to a lysosome-targeting receptor, such as the cation-independent mannose-6-phosphate receptor. The efficacy with which LYTACs
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Medicine from modified mRNA Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-21 Russell Johnson
As the COVID-19 pandemic rapidly spread around the world, the scientific community desperately searched for therapeutic interventions that could be used to treat and alleviate SARS-CoV-2 infection. Several vaccines were developed quickly (compared with conventional development timelines), tested and manufactured. Two of the earliest effective vaccines were produced using a new approach based on the
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Characterizing the metabolomes of phase-separated condensates Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-20
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An allosteric redox switch involved in oxygen protection in a CO2 reductase Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-20 Ana Rita Oliveira, Cristiano Mota, Guilherme Vilela-Alves, Rita Rebelo Manuel, Neide Pedrosa, Vincent Fourmond, Kateryna Klymanska, Christophe Léger, Bruno Guigliarelli, Maria João Romão, Inês A. Cardoso Pereira
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Proximity-inducing pharmacology Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-17 Georg E. Winter, Cristina Mayor-Ruiz
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A single-component, light-assisted uncaging switch for endoproteolytic release Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-16 Mingguang Cui, Seunghwan Lee, Sung Hwan Ban, Jae Ryun Ryu, Meiying Shen, Soo Hyun Yang, Jin Young Kim, Seul Ki Choi, Jaemin Han, Yoonhee Kim, Kihoon Han, Donghun Lee, Woong Sun, Hyung-Bae Kwon, Dongmin Lee
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Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-16 Emily Bordeleau, Peter J. Stogios, Elena Evdokimova, Kalinka Koteva, Alexei Savchenko, Gerard D. Wright
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Biomolecular condensates create phospholipid-enriched microenvironments Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-16 Jason G. Dumelie, Qiuying Chen, Dawson Miller, Nabeel Attarwala, Steven S. Gross, Samie R. Jaffrey
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Micropolarity governs the structural organization of biomolecular condensates Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-16 Songtao Ye, Andrew P. Latham, Yuqi Tang, Chia-Heng Hsiung, Junlin Chen, Feng Luo, Yu Liu, Bin Zhang, Xin Zhang
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Mining the noncanonical terpenome Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-15 Shaonan Liu, Darwin Lara, Yang Hai
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Protein-based bandpass filters for controlling cellular signaling with chemical inputs Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-13 Sailan Shui, Leo Scheller, Bruno E. Correia
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Volatile methyl jasmonate from roots triggers host-beneficial soil microbiome biofilms Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-13 Omkar S. Kulkarni, Mrinmoy Mazumder, Shruthi Kini, Eric D. Hill, Johanan Shao Bing Aow, Samantha Mun Lin Phua, Untzizu Elejalde, Staffan Kjelleberg, Sanjay Swarup
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Structure of GPR101–Gs enables identification of ligands with rejuvenating potential Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-09 Zhao Yang, Jun-Yan Wang, Fan Yang, Kong-Kai Zhu, Guo-Peng Wang, Ying Guan, Shang-Lei Ning, Yan Lu, Yu Li, Chao Zhang, Yuan Zheng, Shu-Hua Zhou, Xin-Wen Wang, Ming-Wei Wang, Peng Xiao, Fan Yi, Cheng Zhang, Peng-Ju Zhang, Fei Xu, Bao-Hua Liu, Hua Zhang, Xiao Yu, Ning Gao, Jin-Peng Sun
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Switching on stress Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-09 Kazuhiro Kashiwagi, Takuhiro Ito
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Checkpoint kinase 2 controls insulin secretion and glucose homeostasis Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-09 Angie Chi Nok Chong, J. Jeya Vandana, Ginnie Jeng, Ge Li, Zihe Meng, Xiaohua Duan, Tuo Zhang, Yunping Qiu, Raimon Duran-Struuck, Kimberly Coker, Wei Wang, Yanjing Li, Zaw Min, Xi Zuo, Neranjan de Silva, Zhengming Chen, Ali Naji, Mingming Hao, Chengyang Liu, Shuibing Chen
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Cofactorless oxygenases guide anthraquinone-fused enediyne biosynthesis Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-09 Chun Gui, Edward Kalkreuter, Yu-Chen Liu, Gengnan Li, Andrew D. Steele, Dong Yang, Changsoo Chang, Ben Shen
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A helical fulcrum in eIF2B coordinates allosteric regulation of stress signaling Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-09 Rosalie E. Lawrence, Sophie R. Shoemaker, Aniliese Deal, Smriti Sangwan, Aditya A. Anand, Lan Wang, Susan Marqusee, Peter Walter
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Molecular basis of threonine ADP-ribosylation of ubiquitin by bacterial ARTs Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-09 Jiaxing Tan, Yan Xu, Xiaofei Wang, Fujie Yan, Wei Xian, Xiaoyun Liu, Yan Chen, Yongqun Zhu, Yan Zhou
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LIS1 (Pac1) binding slows dissociation of dynein from microtubules Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-06
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Auto-inhibition and activation of a short Argonaute-associated TIR-APAZ defense system Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-06 Lijie Guo, Pingping Huang, Zhaoxing Li, Young-Cheul Shin, Purui Yan, Meiling Lu, Meirong Chen, Yibei Xiao
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Target ssDNA activates the NADase activity of prokaryotic SPARTA immune system Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-06 Jun-Tao Zhang, Xin-Yang Wei, Ning Cui, Ruilin Tian, Ning Jia
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Biosynthesis of natural and halogenated plant monoterpene indole alkaloids in yeast Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-06 Samuel A. Bradley, Beata J. Lehka, Frederik G. Hansson, Khem B. Adhikari, Daniela Rago, Paulina Rubaszka, Ahmad K. Haidar, Ling Chen, Lea G. Hansen, Olga Gudich, Konstantina Giannakou, Bettina Lengger, Ryan T. Gill, Yoko Nakamura, Thomas Dugé de Bernonville, Konstantinos Koudounas, David Romero-Suarez, Ling Ding, Yijun Qiao, Thomas M. Frimurer, Anja A. Petersen, Sébastien Besseau, Sandeep Kumar, Nicolas
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Live-cell target engagement of allosteric MEKi on MEK–RAF/KSR–14-3-3 complexes Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-02 William M. Marsiglia, Arthur Chow, Zaigham M. Khan, Liu He, Arvin C. Dar
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Lis1 slows force-induced detachment of cytoplasmic dynein from microtubules Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-02 Emre Kusakci, Zaw Min Htet, Yuanchang Zhao, John P. Gillies, Samara L. Reck-Peterson, Ahmet Yildiz
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DNA-encoded library-enabled discovery of proximity-inducing small molecules Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-11-02 Jeremy W. Mason, Yuen Ting Chow, Liam Hudson, Antonin Tutter, Gregory Michaud, Matthias V. Westphal, Wei Shu, Xiaolei Ma, Zher Yin Tan, Connor W. Coley, Paul A. Clemons, Simone Bonazzi, Frédéric Berst, Karin Briner, Shuang Liu, Frédéric J. Zécri, Stuart L. Schreiber
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Chemical proteomics reveals the target landscape of 1,000 kinase inhibitors Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-30 Maria Reinecke, Paul Brear, Larsen Vornholz, Benedict-Tilmann Berger, Florian Seefried, Stephanie Wilhelm, Patroklos Samaras, Laszlo Gyenis, David William Litchfield, Guillaume Médard, Susanne Müller, Jürgen Ruland, Marko Hyvönen, Mathias Wilhelm, Bernhard Kuster
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A genetically encoded tool to increase cellular NADH/NAD+ ratio in living cells Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-26 Xingxiu Pan, Mina L. Heacock, Evana N. Abdulaziz, Sara Violante, Austin L. Zuckerman, Nirajan Shrestha, Canglin Yao, Russell P. Goodman, Justin R. Cross, Valentin Cracan
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Reducing mitochondrial mysteries Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-26 Rachel M. Guerra, David J. Pagliarini
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Toying with reductive stress Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-26 Alexandria C. Murphy, Melanie R. McReynolds
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Mitochondrial matrix RTN4IP1/OPA10 is an oxidoreductase for coenzyme Q synthesis Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-26 Isaac Park, Kwang-eun Kim, Jeesoo Kim, Ae-Kyeong Kim, Subin Bae, Minkyo Jung, Jinhyuk Choi, Pratyush Kumar Mishra, Taek-Min Kim, Chulhwan Kwak, Myeong-Gyun Kang, Chang-Mo Yoo, Ji Young Mun, Kwang-Hyeon Liu, Kyu-Sun Lee, Jong-Seo Kim, Jae Myoung Suh, Hyun-Woo Rhee
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Targeting ROS production through inhibition of NADPH oxidases Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-26 Joana Reis, Christoph Gorgulla, Marta Massari, Sara Marchese, Sergio Valente, Beatrice Noce, Lorenzo Basile, Ricarda Törner, Huel Cox, Thibault Viennet, Moon Hee Yang, Melissa M. Ronan, Matthew G. Rees, Jennifer A. Roth, Lucia Capasso, Angela Nebbioso, Lucia Altucci, Antonello Mai, Haribabu Arthanari, Andrea Mattevi
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A PASS for protein secretion Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-23 Tianlu Wang, Yubin Zhou
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An orthogonalized PYR1-based CID module with reprogrammable ligand-binding specificity Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-23 Sang-Youl Park, Jingde Qiu, Shuang Wei, Francis C. Peterson, Jesús Beltrán, Angélica V. Medina-Cucurella, Aditya S. Vaidya, Zenan Xing, Brian F. Volkman, Dmitri A. Nusinow, Timothy A. Whitehead, Ian Wheeldon, Sean R. Cutler
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A programmable protease-based protein secretion platform for therapeutic applications Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-23 Xinyi Wang, Liping Kang, Deqiang Kong, Xin Wu, Yang Zhou, Guiling Yu, Di Dai, Haifeng Ye
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MAO–SiR is a tool for visualizing the inner workings of mitochondria Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-20
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Long-term super-resolution inner mitochondrial membrane imaging with a lipid probe Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-19 Shuai Zheng, Neville Dadina, Deepto Mozumdar, Lauren Lesiak, Kayli N. Martinez, Evan W. Miller, Alanna Schepartz
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Catch in nucleus Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-17 Yiyun Song
Extracellular stimuli can cause transient expression of immediate–early genes (IEGs) in mammalian cells, which further activate expression of late-response genes. The precise regulation of mRNA and protein levels of IEGs is crucial for the adaptive responses of cells to changes in their environment. However, the mechanism that underlies the rapid clearance of the protein products of IEGs is unclear
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An antibacterial glove Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-17 Majda Bratovič
Original reference: Cell 186, 4059–4073.e27 (2023)
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Surviving salt stress Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-17 Grant Miura
Sodium ion (Na+) levels need to be carefully regulated, which relies on ion channels and transporters that are present in the plasma membrane and organelle membranes, to ensure normal physiology and ion homeostasis. The measurement of organellar Na+ levels is difficult owing to the acidic nature of organelle lumens. To overcome the pH dependence, Zou et al. have developed a pH-insensitive Na+ reporter
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Quantum leap against cancer Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-17 Francesco Zamberlan
A cell can be viewed as interconnected bioelectrical circuits that use electron transfer processes to communicate with each other, with cytochrome c (Cyt c) and its redox processes having a central role. The redox processes of Cyt c are known to occur via electron tunneling, and are crucial for its translocation into the cytosol and modulating its conformation for binding to apoptotic protease activating
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It’s in the blood Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-17 Russell Johnson
Transition metal-catalyzed reactions are widely used for carbon–carbon bond formation in chemical synthesis, owing to their efficiency and reliability. However, the catalysts are often sensitive to moisture or oxygen so adapting transition metal-catalyzed reactions to work in living organisms has proven difficult, which limits their use for in situ synthesis. Synthesis of non-endogenous chemicals at
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Badminton at nanoscale Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-17 Gene Chong
Original reference: J. Am. Chem. Soc. 145, 21454–21464 (2023)
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Improving data quality in chemical biology Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-16 Stefan Knapp, Susanne Müller
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Biotransformations for bioremediation Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-16 Russell Johnson
Byong-Hun Jeon works in the Department of Earth Resources and Environmental Engineering at Hanyang University, South Korea. His research is focused on biodegradation of environmental contaminants. Nature Chemical Biology spoke to Byong-Hun about the chemical biology of phytoremediation and phycoremediation, and the opportunities that they offer.
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A new road to STING activation Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-13 Ariana Sulpizio, Luke L. Lairson
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Widespread biosynthesis of 16-carbon terpenoids in bacteria Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-12 Yao-Tao Duan, Aikaterini Koutsaviti, Maria Harizani, Codruta Ignea, Vassilios Roussis, Yong Zhao, Efstathia Ioannou, Sotirios C. Kampranis
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Activation of human STING by a molecular glue-like compound Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-12 Jie Li, Stephen M. Canham, Hua Wu, Martin Henault, Lihao Chen, Guoxun Liu, Yu Chen, Gary Yu, Howard R. Miller, Viktor Hornak, Scott M. Brittain, Gregory A. Michaud, Antonin Tutter, Wendy Broom, Mary Ellen Digan, Sarah M. McWhirter, Kelsey E. Sivick, Helen T. Pham, Christine H. Chen, George S. Tria, Jeffery M. McKenna, Markus Schirle, Xiaohong Mao, Thomas B. Nicholson, Yuan Wang, Jeremy L. Jenkins,
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Antibiotic identified by AI Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-11 Angela Cesaro, Cesar de la Fuente-Nunez
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Endogenous currents in HEK 293 cells are inhibited by memantine Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-05 Neil L. Harrison, Geoffrey W. Abbott, Conor McClenaghan, Colin G. Nichols, David Cabrera-Garcia
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Reply to: Targeted protein S-nitrosylation of ACE2 inhibits SARS-CoV-2 infection Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-05 Chang-ki Oh, Juan Piña-Crespo, Maria Talantova, Lauren N. Carnevale, Charlotte Stoneham, Mary Lewinski, John Guatelli, Stuart A. Lipton
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Assigning functionality to cysteines by base editing of cancer dependency genes Nat. Chem. Biol. (IF 14.8) Pub Date : 2023-10-02 Haoxin Li, Tiantai Ma, Jarrett R. Remsberg, Sang Joon Won, Kristen E. DeMeester, Evert Njomen, Daisuke Ogasawara, Kevin T. Zhao, Tony P. Huang, Bingwen Lu, Gabriel M. Simon, Bruno Melillo, Stuart L. Schreiber, Jens Lykke-Andersen, David R. Liu, Benjamin F. Cravatt