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Pharmacodynamics of Akt drugs revealed by a kinase-modulated bioluminescent indicator Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-02-11 Yan Wu, Chenzhou Hao, Chao Gao, Matt Hageman, Sungmoo Lee, Thomas A. Kirkland, Nathanael S. Gray, Yichi Su, Michael Z. Lin
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Expanding the molecular grammar of polar residues and arginine in FUS phase separation Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-02-07 Noah Wake, Shuo-Lin Weng, Tongyin Zheng, Szu-Huan Wang, Valentin Kirilenko, Jeetain Mittal, Nicolas L. Fawzi
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Persistent activation of TRPM4 triggers necrotic cell death characterized by sodium overload Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-02-06 Wan Fu, Jianghuang Wang, Tianyu Li, Yuhui Qiao, Zili Zhang, Xiaomin Zhang, Mingkai He, Yan Su, Ziye Zhao, Chen Li, Ronghua Xiao, Yujun Han, Shen Zhang, Zhiqiang Liu, James Lin, Guoqiang Chen, Yang Li, Qing Zhong
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Programming biological communication between distinct membraneless compartments Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-02-05 Bo-Tao Ji, He-Tong Pan, Zhi-Gang Qian, Xiao-Xia Xia
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REPLACE-ing RNA through evolution Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-02-04 Christopher E. Denes, G. Gregory Neely
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Mechanistic insights and approaches for beta cell regeneration Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-29 Christos Karampelias, Ka-Cheuk Liu, Anders Tengholm, Olov Andersson
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ADSL promotes autophagy and tumor growth through fumarate-mediated Beclin1 dimethylation Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-29 Lei Wang, Runze Shi, Shuo Wang, Yuran Duan, Zheng Wang, Peixiang Zheng, Xue Sun, Xiaohan Chen, Guimei Ji, Yuli Shen, Bofei Dong, Yanni Lin, Ting Wen, Qi Tian, Zhanpeng Guo, Yueru Hou, Shiqi Wu, Ling Xiao, Min Li, Liwei Xiao, Qingang Wu, Ying Meng, Guijun Liu, Sofie Duan, Xueli Bai, Tong Liu, Zhiren Zhang, Peng Zhan, Zhimin Lu, Daqian Xu
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Quinone extraction drives atmospheric carbon monoxide oxidation in bacteria Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-29 Ashleigh Kropp, David L. Gillett, Hari Venugopal, Miguel A. Gonzálvez, James P. Lingford, Surbhi Jain, Christopher K. Barlow, Jie Zhang, Chris Greening, Rhys Grinter
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How to build a [2Fe–2S] cluster Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-28 Anna Moseler, Stephan Wagner, Andreas J. Meyer
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The measurement, regulation and biological activity of FAHFAs Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-28 Dan Tan, Alan Saghatelian
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The ISC machinery assembles [2Fe–2S] clusters by formation and fusion of [1Fe–1S] precursors Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-27 Sylvain Gervason, Rafal Dutkiewicz, Kristian Want, Rania Benazza, Rémi Mor-Gautier, Aneta Grabinska-Rogala, Christina Sizun, Oscar Hernandez-Alba, Sarah Cianferani, Bruno Guigliarelli, Bénédicte Burlat, Benoit D’Autréaux
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Implications of frequent hitter E3 ligases in targeted protein degradation screens Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-27 Xiaoyu Zhang, Gabriel M. Simon, Benjamin F. Cravatt
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Plasma membrane-associated ARAF condensates fuel RAS-related cancer drug resistance Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-27 Wen Li, Xiaoxian Shi, Caiwei Tan, Zhaodi Jiang, Mingyi Li, Zhiheng Ji, Jing Zhou, Mengxin Luo, Zuyan Fan, Zhifan Ding, Yue Fang, Jun Sun, Junjun Ding, Huasong Lu, Weirui Ma, Wei Xie, Wenjing Su
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Rolling toward circular solutions Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-23 Yiyun Song
Circular RNAs (circRNAs) are more stable than linear RNAs because they are resistant to degradation by exonucleases, making them a promising option for RNA-based therapeutics. However, existing methods for synthesizing circRNAs face several challenges, such as low yields for longer circRNAs, relatively low translation efficiency and difficulties in incorporating chemical modifications. To address these
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TRIMming the nuclear pore Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-23 Grant Miura
Molecular glues are small-molecule compounds that promote interactions between a protein of interest and an E3 ubiquitin ligase, leading to selective degradation of the protein of interest. However, these glues are often identified serendipitously through phenotypic screening. Lu et al. have now identified a glue called acepromazine (ACE) that promotes formation of a TRIM21–NUP98 ternary complex, resulting
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An influenza mutation switch Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-23 Francesco Zamberlan
The highly pathogenic influenza H5N1 clade 2.3.4.4b virus has been dominant in birds and bovines in North America since 2021, and was responsible for the first case of human infection by bovine H5N1 in Texas in 2024 (Texas H5). Although this case raised concerns about the adaptation of the virus, there is fortunately a barrier to the interspecies jump as avian-type hemagglutinin (HA) recognizes cell
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Hashing the message with cells Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-20 Jongmin Kim, Elisa Franco
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Continuous selection in E. coli to identify cyclic peptide inhibitors of protein aggregation Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-17
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A DNA phosphorothioation pathway via adenylated intermediate modulates Tdp machinery Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-16 Tianchen An, Qian Tan, Lixu Jiang, Li Liu, Xing Jiang, Liying Liu, Xiaofei Chang, Xihao Tian, Zixin Deng, Shuai Gao, Lianrong Wang, Shi Chen
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Small molecule inhibits KCNQ channels with a non-blocking mechanism Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-15 Junnan Li, Zhenni Yang, Shaoying Zhang, Yangliang Ye, Jiangnan He, Yan Zhang, Huayun Han, Wan Kong, Jiangru Liu, Yu Min, Juwen Shen, Lianghe Mei, Zongsheng Chen, Panpan Hou, Jiangtao Guo, Qiansen Zhang, Huaiyu Yang
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PROTAR Vaccine 2.0 generates influenza vaccines by degrading multiple viral proteins Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-15 Chunhe Zhang, Jihuan Hou, Zhen Li, Quan Shen, Haiqing Bai, Li Chen, Jinying Shen, Ping Wang, Yinlei Su, Jing Li, Qisi Zhang, Chengyao Liu, Xuetong Xi, Fei Qi, Yuting Chen, Xin Xie, Adam Yongxin Ye, Xiaoheng Liu, Roberto Plebani, George Church, Longlong Si
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Aromatic side-chain crosslinking in RiPP biosynthesis Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-15 Sanath K. Kandy, Michael A. Pasquale, Jonathan R. Chekan
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Orthogonalized human protease control of secreted signals Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-15 Carlos A. Aldrete, Connor C. Call, Lucas E. Sant’Anna, Alexander E. Vlahos, Jimin Pei, Qian Cong, Xiaojing J. Gao
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Catalytic-independent functions of the Integrator–PP2A complex (INTAC) confer sensitivity to BET inhibition Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-14 Pengyu Fan, Xue-Ying Shang, Aixia Song, Shuo Chen, Run-Yuan Mao, Jingchuan Ma, Jiwei Chen, Zhenning Wang, Hai Zheng, Bolin Tao, Lei Hong, Jiaxian Liu, Wei Xu, Wei Jiang, Hongjie Shen, Qi Zhang, Huijuan Yang, Xiao-Ming Meng, Fei Lan, Jingdong Cheng, Congling Xu, Peng Zhang, Hai Jiang, Fei Xavier Chen
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Synergistic protection of nascent DNA at stalled forks by MSANTD4 and BRCA1/2–RAD51 Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-14 Haihua Xie, Lizhi Song, Genxiang Mao, Jinhua Han, Jiali Pu, Zhibing Wu, Jun Chen, Jianwei Zhou, Jun Huang, Dong Fang, Ting Liu
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Transforming an ATP-dependent enzyme into a dissipative, self-assembling system Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-13 Yiying Li, Jie Zhu, Zhiyin Zhang, Jiapeng Wei, Fengbin Wang, Georg Meisl, Tuomas P. J. Knowles, Edward H. Egelman, F. Akif Tezcan
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A cell-free biosensor signal amplification circuit with polymerase strand recycling Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-13 Yueyi Li, Tyler Lucci, Matias Villarruel Dujovne, Jaeyoung Kirsten Jung, Daiana A. Capdevila, Julius B. Lucks
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Rapid discovery of cyclic peptide protein aggregation inhibitors by continuous selection Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-13 Linwei Yang, Jingwei Zhang, James S. Andon, Lingjun Li, Tina Wang
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The molecular mechanism of temperature-dependent phase separation of heat shock factor 1 Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-10 Qiunan Ren, Linge Li, Lei Liu, Juan Li, Chaowei Shi, Yujie Sun, Xuebiao Yao, Zhonghuai Hou, ShengQi Xiang
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Abiotic catalysis promoted by liquid–liquid phase separation Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-09
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Chemically engineered antibodies for autophagy-based receptor degradation Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-09 Binghua Cheng, Meiqing Li, Jiwei Zheng, Jiaming Liang, Yanyan Li, Ruijing Liang, Hui Tian, Zeyu Zhou, Li Ding, Jian Ren, Wenli Shi, Wenjie Zhou, Hailiang Hu, Long Meng, Ke Liu, Lintao Cai, Ximing Shao, Lijing Fang, Hongchang Li
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Structure and catalytic activity of the SAM-utilizing ribozyme SAMURI Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-08 Hsuan-Ai Chen, Takumi Okuda, Ann-Kathrin Lenz, Carolin P. M. Scheitl, Hermann Schindelin, Claudia Höbartner
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Artificial metalloenzyme assembly in cellular compartments for enhanced catalysis Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-08 Tong Wu, Xianhui Chen, Yating Fei, Guopu Huang, Yingjiao Deng, Yingjie Wang, Anming Yang, Zhiyong Chen, N. Gabriel Lemcoff, Xinxin Feng, Yugang Bai
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Population-level amplification of gene regulation by programmable gene transfer Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-08 Hye-In Son, Grayson S. Hamrick, Ashwini R. Shende, Kyeri Kim, Kaichun Yang, Tony Jun Huang, Lingchong You
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FUT10 and FUT11 are protein O-fucosyltransferases that modify protein EMI domains Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-07 Huilin Hao, Youxi Yuan, Atsuko Ito, Benjamin M. Eberand, Harry Tjondro, Michelle Cielesh, Nicholas Norris, Cesar L. Moreno, Joshua W. C. Maxwell, G. Gregory Neely, Richard J. Payne, Melkam A. Kebede, Ramona J. Bieber Urbauer, Freda H. Passam, Mark Larance, Robert S. Haltiwanger
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Molecular mechanisms of inverse agonism via κ-opioid receptor–G protein complexes Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-07 Aaliyah S. Tyson, Saif Khan, Zenia Motiwala, Gye Won Han, Zixin Zhang, Mohsen Ranjbar, Daniel Styrpejko, Nokomis Ramos-Gonzalez, Stone Woo, Kelly Villers, Delainey Landaker, Terry Kenakin, Ryan Shenvi, Susruta Majumdar, Cornelius Gati
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Mechanisms of metabolism-coupled protein modifications Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-07 Bingsen Zhang, Frank C. Schroeder
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Diary of a cell in DNA ‘chyrons’ Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-06 Chao Chen, Harris H. Wang
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Engineering covalent small molecule–RNA complexes in living cells Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-06 Raphael Bereiter, Laurin Flemmich, Kamila Nykiel, Sarah Heel, Stephan Geley, Malou Hanisch, Clemens Eichler, Kathrin Breuker, Alexandra Lusser, Ronald Micura
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E2–Ub-R74G strategy reveals E2-specific ubiquitin conjugation profiles in live cells Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-06 Siqi Shen, Hang Yin
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A rapid chemical reprogramming system to generate human pluripotent stem cells Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-03 Yanglu Wang, Fangqi Peng, Zhihan Yang, Lin Cheng, Jingxiao Cao, Xiaodi Fu, Huanjing He, Ruyi Cai, Weizhen Zeng, Yingshuai Dong, Guanxian Chen, Gongxin Peng, Shijia Liuyang, Guan Wang, Jinlin Wang, Rong Mu, Cheng Li, Jingyang Guan, Hongkui Deng
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The impact of library size and scale of testing on virtual screening Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-03 Fangyu Liu, Olivier Mailhot, Isabella S. Glenn, Seth F. Vigneron, Violla Bassim, Xinyu Xu, Karla Fonseca-Valencia, Matthew S. Smith, Dmytro S. Radchenko, James S. Fraser, Yurii S. Moroz, John J. Irwin, Brian K. Shoichet
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Orthogonal RNA replication enables directed evolution and Darwinian adaptation in mammalian cells Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-03 Liang Ma, Yihan Lin
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Programmable trans-splicing riboregulators for complex cellular logic computation Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-02 Yuanli Gao, Rizki Mardian, Jiaxin Ma, Yang Li, Christopher E. French, Baojun Wang
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Community-specific cell death sustains bacterial expansion under phosphorus starvation Nat. Chem. Biol. (IF 12.9) Pub Date : 2025-01-02 Ziyan Wang, Lingbin Zeng, Shouxian Hu, Qianyu Hu, Yuzhen Zhang, Jintao Liu
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The many paths ascending to ferroptosis Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24 Marcus Conrad, Adam Wahida
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20 years of Nature Chemical Biology Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24
To celebrate the start of our 21st volume, we are featuring a collection of pieces that discuss the progress in chemical biology over the past 20 years. These pieces highlight some of the landmark findings that have shaped the field and outline future directions.
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Reflecting on 20 years of progress Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24 Russell Johnson
The field of chemical biology has changed dramatically over the past 20 years. Here, we speak to Sarah E. O’Connor, Benjamin F. Cravatt and Chengqi Yi about the major changes that have affected the field, the advances that have affected them and their research, and their thoughts about the most important questions currently facing chemical biologists.
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Chemical biology tools take the strain Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24 Kenward Vong, Katsunori Tanaka
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Building the first base editors Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24 Amanda L. Waterbury, Irtiza Iram, Brian B. Liau
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Expanding beyond the capability of nature Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24 Kridsadakorn Prakinee, Pimchai Chaiyen
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The protein universe in 3D Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24 Isaac Ellmen, Matthew I. J. Raybould, Charlotte M. Deane
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De novo discovery of bicycles Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24 Xu-Dong Kong, Changlin Tian
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Targeted protein degradation comes of age Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24 Mary E. Matyskiela
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DNA-encoded chemical libraries on stage Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24 Andreas Gloger, Jörg Scheuermann
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Thoughts for the future Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-24 Lona M. Alkhalaf, Cheryl Arrowsmith, Emily P. Balskus, Giovanna Bergamini, Rashna Bhandari, Christopher J. Chang, Peng Chen, Xing Chen, Alessio Ciulli, Julia A. Cricco, Benjamin G. Davis, Martina Delbianco, Natalia Dudareva, Erin Dueber, Fleur Ferguson, Priscila Oliveira de Giuseppe, Itaru Hamachi, Ming Chen Hammond, Stavroula K. Hatzios, Won Do Heo, Jon Paul Janet, Siddhesh S. Kamat, Stefan Knapp
As Nature Chemical Biology approaches its third decade we asked a collection of chemical biologists, “What do you think are the most exciting frontiers or the most needed developments in your main field of research?” — here is what they said.
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Automated orthogonal tRNA generation Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-20 Martin Spinck, Amir Guppy, Jason W. Chin
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Author Correction: Targeting colorectal cancer with small-molecule inhibitors of ALDH1B1 Nat. Chem. Biol. (IF 12.9) Pub Date : 2024-12-09 Zhiping Feng, Marisa E. Hom, Thomas E. Bearrood, Zachary C. Rosenthal, Daniel Fernández, Alison E. Ondrus, Yuchao Gu, Aaron K. McCormick, Madeline G. Tomaske, Cody R. Marshall, Toni Kline, Che-Hong Chen, Daria Mochly-Rosen, Calvin J. Kuo, James K. Chen
Correction to: Nature Chemical Biology https://doi.org/10.1038/s41589-022-01048-w, published online 4 July 2022.
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