Acantharians (supergroup Rhizaria) can be important contributors to surface primary production and to carbon flux to the deep sea, but are often underestimated because their delicate structures are destroyed by plankton nets or dissolved by chemical fixatives. As they are also uncultured, relatively little is known about acantharian biology, especially regarding their life cycles. Here, we take a paired

Lake Superior is often described as the most pristine of the Laurentian Great Lakes, but in the past decade Dolichospermum blooms have been observed. Land use in the adjacent watershed has not changed appreciably during this time, but the lake is warming and climatological variables correspond with presence of blooms. Blooms occurred only in relatively warm years as measured by degree days. Furthermore

Cadmium (Cd) can serve as nutrient in marine diatoms by partially replacing zinc (Zn) in Zn‐limited cells. A major basis for this is the replacement of Cd for Zn in a Cd‐containing carbonic anhydrase (CDCA) needed for cellular acquisition of CO2. As a result of these interactions, cells can become colimited by Zn, Cd, and CO2. Large cell size should restrict the cellular uptake of Zn, Cd, and CO2 due

The seasonal development of an ice cover is a characteristic feature of subarctic lakes, yet the biogeochemical cycling of redox sensitive elements under ice, including arsenic (As), is poorly understood. We conducted comprehensive geochemical characterization of lake waters, sediment pore waters and lake sediments over two consecutive years to develop a conceptual model of As, iron (Fe), and sulfur

Documenting the patterns of biological diversity on Earth has always been a central challenge in macroecology and biogeography. However, we are only beginning to generate an understanding of the global patterns and determinants of macrophyte diversity. Here, we studied large‐scale variation and community‐environment relationships of lake macrophytes along climatic and geographical gradients using regional

A mechanistic understanding of dissolved organic phosphorus (DOP) utilization, and its role in the marine P cycle, requires knowledge of DOP molecular composition. In this study, a recently developed approach coupling electrodialysis and reverse osmosis with solution 31P‐NMR analysis was used to examine DOP composition within a tidally dominated salt‐marsh estuary (North Inlet, South Carolina) over

To determine the source of excess methane in oxic, surface‐water columns often found in freshwater environments, we measured the in situ concentration and stable isotopic compositions (δ13C and δ2H) of methane in Lake Biwa, a mesotrophic lake in Japan. The values from the littoral zone and lake‐floor sediments were determined, besides those in the water column of the pelagic zone. Furthermore, we conducted

The mixing and stratification present under ice‐covered lakes during winter can potentially influence the oxygen concentrations in the subsequent spring. During winter, plankton rely on updrafts caused by convection to remain in the photic zone and perform primary production. Thus, there is a crucial link in winter between under‐ice light levels, circulation, and dissolved oxygen (DO) production. Detailed

Mean annual air temperatures in the High Arctic are rising rapidly, with extreme warming events becoming increasingly common. Little is known, however, about the consequences of such events on the ice‐capped lakes that occur abundantly across this region. Here, we compared 2 years of high‐frequency monitoring data in Ward Hunt Lake in the Canadian High Arctic. One of the years included a period of

Recent discovery of methane (CH4) production in oxic waters challenges the conventional understanding of strict anoxic requirement for biological CH4 production. High‐resolution field measurements in Lake Stechlin, as well as incubation experiments, suggested that oxic‐water CH4 production occurred throughout much of the water column and was associated with phytoplankton especially diatoms, cyanobacteria

Littoral benthic primary production is considered the most important energy source of consumers in subarctic lakes. We analyzed essential fatty acid (EFA) and amino acid (EAA) content of 23 littoral benthic macroinvertebrate taxa as well as cladocerans and copepods from pelagic and littoral habitats of 8–9 subarctic lakes to compare their nutritional quality. Pelagic crustacean zooplankton had significantly

Global warming is enhancing the mobilization of organic carbon (C) from Arctic soils into streams, where it can be mineralized to CO2 and released to the atmosphere. Abiotic photo‐oxidation might drive C mineralization, but this process has not been quantitatively integrated with biological processes that also influence CO2 dynamics in aquatic ecosystems. We measured CO2 concentrations and the isotopic

The Maumee River is the primary source for nutrients fueling seasonal Microcystis ‐dominated blooms in western Lake Erie's open waters though such blooms in the river are infrequent. The river also serves as source water for multiple public water systems and a large food services facility in northwest Ohio. On 20 September 2017, an unprecedented bloom was reported in the Maumee River estuary within

Climate warming impacts ecosystems through multiple interacting pathways, including via direct thermal responses of individual taxa and the combined responses of closely interacting species. In this study, we examined how warming and infection by an oomycete parasite (Saprolegnia ) affect the dominant zooplankter of Russia's Lake Baikal, the endemic copepod Epischurella baikalensis . We used a combination

The West Antarctic Peninsula (WAP) is a highly productive polar ecosystem where phytoplankton dynamics are regulated by intense bottom‐up control from light and iron availability. Rapid climate change along the WAP is driving shifts in the mixed layer depth and iron availability. Elucidating the relative role of each of these controls and their interactions is crucial for understanding of how primary

Emission of greenhouse gases (GHGs) from inland waters is recognized as highly important and an understudied part of the terrestrial carbon (C) biogeochemical cycle. These emissions are still poorly quantified in subarctic regions that contain vast amounts of surface C in permafrost peatlands. This is especially true in NE European peatlands, located within sporadic to discontinuous permafrost zones

Notwithstanding the importance of analyzing the variations of population dynamic traits along environmental gradients for assessing coral resilience to global climate change, temperate areas are more understudied than tropical regions. In the Mediterranean Sea, some studies are available for its western basin, while there is a lack of information for its eastern basin. This study starts to fill this

Microphytobenthos forms an important part of the diet of macrofauna (macrozoobenthos) in many intertidal ecosystems. It is unclear, however, whether the dependence of macrofauna on microphytobenthos varies spatially within and among tidal systems. We aim (1) to assess the spatial variability in the importance of microphytobenthos in the diet of macrofauna (i.e., between and within two tidal basins

Methane flux from freshwater mineral‐soil (FWMS) wetlands and its variability among sites is largely modulated by plant‐mediated transport. However, plant‐mediated transport processes are rarely resolved in land surface models and are poorly parametrized for plants commonly found in FWMS wetlands. Here, relationships between methane flux and CO2 uptake, as well as plant conductance of methane were

Coastal zones of Antarctica harbor rich but highly variable phytoplankton communities. The mechanisms that control the dynamics of these communities are not well defined. Here we elucidate the mechanisms that drive seasonal species succession, based on algal photophysiological characteristics and environmental factors. For this, phytoplankton community structure together with oceanographic parameters

Radiocarbon natural abundance (Δ14C) has emerged as a useful dietary tracer in freshwater ecology for the past decade, yet its applicability for separating aquatic and terrestrial resources has not been examined quantitatively. Here, we report Δ14C values of stream invertebrates in different functional feeding groups collected from the upper South Fork Eel River watershed, northern California. We found

Understanding energy flow through ecosystems and among sub‐habitats is critical for understanding patterns of biodiversity and ecosystem function. It can also be of considerable applied interest in situations where managing for connectivity among habitats is important for restoring degraded ecosystems. Here, we describe patterns of basal resource quality and identify primary basal energy sources in

Whether pristine ecosystems with intact trophic structures are more resilient to anthropogenic pressures than ecosystems facing human exploitation is a pressing question to ecological theory and management. For coastal vegetated ecosystems such as kelp forests and seagrass meadows, a number of studies recently highlighted that under eutrophic conditions, trophic cascades are particularly important

Global mangrove loss is occurring from deforestation and extreme climatic events, but changes to the coastal carbon cycle following mangrove mortality and/or loss are not well understood. In 2015/2016, a massive climate‐driven mangrove dieback event occurred over ~ 1000 km of Australian coastline. To assess carbon loss following mortality, carbon fluxes in adjacent living and dead forest areas were

For marine fish with ontogenetic shifts in habitat requirements, survival is dependent upon oceanographic transport of pelagic larvae from spawning locations and the arrival of settlement‐stage larvae to nursery habitats. Settlement success for fish with nurseries on the continental shelf, such as many flatfish, relies on routes of transport that facilitate the delivery of larvae from offshore to suitable

In the Southern Ocean, diatom blooms have attracted a lot of attention, while other small nonsilicified phytoplankton groups have been less studied. Here, small phytoplankton (< 20 μ m, including small diatoms and nonsilicified small phytoplankton) are focused on in two contrasting areas: the productive Kerguelen plateau and its surrounding low productivity waters. To assess the diversity and spatial

In the North Pacific Subtropical Gyre, the daily pulse of photosynthetic carbon (C) fixation is closely balanced by losses. This concert of growth and loss is driven by a diverse assemblage of plankton, including the diazotroph Crocosphaera sp. While primary production is relatively well characterized in this ecosystem, the extent of C transfer to secondary producers is poorly constrained. Here, we

By shunting material out of the predatory pathway toward detritus and dissolved material, viruses are believed to have an important impact on biogeochemical functions of the pelagic microbial food web. To include viruses as a single plankton functional type (PFT) in dynamic food web models is, however, not trivial since they will then compete with predators for the same host/prey community as a shared

Dissolved free taurine, an important osmolyte in phytoplankton and metazoans, has been shown to be a significant carbon and energy source for prokaryotes in the North Atlantic throughout the water column. However, the extent of the coupling between taurine production and consumption over a seasonal cycle has not been examined yet. We determined taurine production by abundant crustacean zooplankton

Many aquatic plants are flexible and bend in response to current. This reconfiguration can reduce the drag on the plant, both by reducing the frontal area and by creating a more streamlined shape. Previous studies have considered how the buoyancy and rigidity of a plant impact the drag reduction. This study additionally considered how reconfiguration impacts the sheltering between leaves on a plant

Watersheds of the coastal temperate rainforests of Pacific North America export large amounts of organic carbon (OC) to the coastal ocean. While it has been suggested that terrestrially derived organic matter could subsidize marine food webs and affect ocean biogeochemistry along the coastal margin, little work has been done to quantify and characterize OC across the freshwater to marine continuum

The Rhizaria is a super‐group of amoeboid protists with ubiquitous distributions, from the euphotic zone to the twilight zone and beyond. While rhizarians have been recently described as important contributors to both biogenic silica and carbon fluxes, we lack the most basic information about their ecological habitats and preferences. Here, using in situ imaging (Underwater Vision Profiler 5), we characterize

Deep chlorophyll maxima (DCM) are common in stratified lakes and oceans, and phytoplankton growth within DCM often contributes significantly to total system production. Theory suggests that properties of DCM should be predictable by trophic state, with DCM becoming deeper, broader, and less productive with greater oligotrophy. However, rigorous tests of these expectations are lacking in freshwater

In situ plant production is often assumed to be the major contributor to organic matter (OM) accumulation and vertical accretion in tidal marshes. Here, we evaluate the contribution of mud‐associated OM in salt and brackish marshes in Louisiana. Based on 14 soil cores, the OM content of the mud fraction—i.e., any material smaller than 64 μ m—was 17% ± 7% for the salt marshes and 28% ± 14% for the brackish

The importance of zinc (Zn) as a nutrient and its ability to be substituted for by cobalt (Co) have been characterized in model marine diatoms. However, the extent to which this substitution capability is distributed among diatom taxa is unknown. Zn/Co metabolic substitution was assayed in four diatom species as measured by the effect of free ion concentrations of Zn2+ and Co2+ on specific growth rate

The relative importance of top‐down vs. bottom‐up control of phytoplankton biomass in aquatic ecosystems has been long debated and studied. However, few studies have considered the relative importance of top‐down vs. bottom‐up control on phytoplankton vertical distributions and characteristics of deep chlorophyll maxima (DCMs), and fewer still have investigated the importance of these drivers for multiple

Chytrid fungal parasites are ubiquitous in aquatic ecosystems and infect a wide array of aquatic organisms, including all phytoplankton groups. In addition to their role as parasites, chytrids serve as food to zooplankton, thereby establishing an alternative trophic link between primary and secondary production in pelagic food webs, the so‐called mycoloop. We hypothesized that, in addition to the mycoloop

It is widely hypothesized that noncalcifying macroalgae will be more productive and abundant in increasingly warm and acidified oceans. Macroalgae vary greatly in the magnitudes and interactions of responses of photosynthesis and growth to multiple stressors associated with climate change. A knowledge gap that exists between the qualitative “macroalgae will benefit” hypothesis and the variable outcomes

The increased input of nutrients into biological systems has been shown to result in altered biotic interactions through changes in food availability. The aim of this study was to test for an association between phytoplankton nutrient content and epibiont variables in natural zooplankton populations. Via a field survey, we studied how a gradient in food quantity and quality impacted host population

Restricted horizontal exchange and vertical stratification restrict ventilation of bottom waters in many coastal systems, leading to stagnant basin water conditions. Dense inflows from oceanic sources can lead to dramatic changes in basin‐scale properties over very short timescales. Here, we used a semi‐enclosed coastal basin with deep‐anoxia (Lough Furnace) as a test bed, in order to discern estuary‐ocean

This study focuses on the interactions between sediment stability and biological and physical variables that influence the erodibility across different habitats. Sampling at short‐term temporal scales illustrated the persistence of the microphytobenthos (MPB) biomass even during periods of frequent, high physical disturbance. The role of MPB in biological stabilization along the changing sedimentary

Nitrogen and phosphorus budgets were compiled for the littoral (29 km2) and pelagic (329 km2) of ancient, deep, clear, and hard water Lake Ohrid (Albania and North Macedonia), to assess the importance of the littoral in nutrient retention. P originates mainly from domestic point sources (73%), for N this is karst seepage (50%). Total littoral loads are estimated at 1700 kg P and 23,200 kg N km−2 (area

Many aquatic microbes form colonies, yet little is known about their abundance and fitness relative to single‐celled taxa. The formation of diatom chains, in particular, has implications for diatom growth, survival, and carbon transfer. Here, we utilize an autonomous underwater microscope, combined with traditional microscopy, to develop a novel, multiyear record of the abundance of single‐cell and

In oligotrophic ocean regions, dissolved organic phosphorus (DOP) plays a prominent role as a source of phosphorus (P) to microorganisms. An important bioavailable component of DOP is phosphonates, organophosphorus compounds with a carbon‐phosphorus (C‐P) bond, which are ubiquitous in high molecular weight dissolved organic matter (HMWDOM). In addition to being a source of P, the degradation of phosphonates

The oceans are natural sources of atmospheric methane (CH4), but the origin of excess CH4 at the surface remains enigmatic. Incubation experiments were conducted in the western North Pacific (WNP) and its marginal seas (i.e., Yellow Sea and South China Sea [SCS]) to identify the degradation of methylphosphonate (MPn) to CH4 in the oceans and the microbes associated with MPn‐driven CH4 production. In

Trait‐based approaches have broadened our understanding of how the composition of ecological communities responds to environmental drivers. This research has mainly focussed on abiotic factors and competition determining the community trait distribution, while effects of trophic interactions on trait dynamics, if considered at all, have been studied for two trophic levels at maximum. However, natural

Ocean uptake of carbon dioxide (CO2) is causing changes in carbonate chemistry that affects calcification in marine organisms. In coastal areas, this CO2‐enriched seawater mixes with waters affected by seasonal degradation of organic material loaded externally from watersheds or produced as a response to nutrient enrichment. As a result, coastal bivalves often experience strong seasonal changes in

The potential of Blue Carbon as an integral part of global climate change adaptation and mitigation strategies requires quantification of drivers and rates of organic carbon (OC) burial and storage. However, there is limited recognition of how land use impacts benthic assemblages, their bioturbation potential, and OC burial in mangrove forests and tidal flats. Here we evaluated the effects of mangrove

Macroalgae are important components on coral reefs that underpin food webs but are also indicators of declines in coral reef condition. The sensitivity of macroalgal communities to environmental factors, including climate and pollutants from the land, is important for the future state of coral reefs. We assessed regional variation in the photosynthetic physiology of macroalgae on the Great Barrier

Microphytobenthos (MPB) are an important nitrogen (N) sink in coastal systems, but little is known about the fate of N assimilated by MPB. We used an in situ 15N pulse‐chase experiment in intertidal, nonpermeable, sandy mud to trace the assimilation, transformation, and loss from the sediment of MPB‐N over 31 d. Following assimilation, 15N was tightly retained in surface sediments, with only up to

Although plankton thin layers have been described and modeled in a variety of environments, the physical structure surrounding the layer, associated biological rates, and distributions of multiple trophic levels are rarely examined simultaneously. Similar combinations of measurements, such as growth, mortality, and spatial relationships among plankton, are key to understanding how physical processes

Landscape models are increasingly used to classify and predict the structure and productivity of data‐limited aquatic ecosystems. One such suite of ecosystems is on the remote North and Central Coast (NCC) of British Columbia, where sockeye salmon (Oncorhynchus nerka) rear in more than 150 lakes. Given their remoteness and limited resources for assessment, limnological and population monitoring in

Mesopredator release following top predator loss may reduce biodiversity and harm foundation species. We investigated the potential for moderate environmental changes to trigger mesopredator release by disrupting the foraging ability of top predators without affecting their abundance by performing an in situ experiment designed to isolate the magnitude of mesopredator effects on oyster reefs (Crassostrea

In a future climate change perspective, the interactions among different life‐forms of primary producers will likely be altered, leading to changes in the relative dominance among macrophytes, filamentous, and planktonic algae. In order to improve the possibilities to forecast future ecosystem services and function, we therefore conducted a long‐term mesocosm study where primary producers were exposed

Flow is an important physical driver of biofilm communities. Here, we tested the effects of the near bed flows in two mountainous stream reaches on the structure of biofilm microbial guilds (autotrophs, heterotrophic bacteria, and heterotrophic protists) within and across trophic levels. Near bed flow velocity and turbulent kinetic energy were important physical drivers for structuring the communities

Torrential rain and extreme flooding caused by Atlantic hurricanes mobilize a large pool of organic matter (OM) from coastal forested watersheds in the southeastern United States. However, the mobilization of toxic metals such as mercury (Hg) that are associated with this vast pool of OM are rarely measured. This study aims to assess the variations of total Hg (THg) and methylmercury (MeHg) levels

Eutrophication and climate change will affect habitats of species and more generally, the structure and functioning of ecosystems. We used a three‐dimensional, coupled hydrodynamic‐biogeochemical model to investigate potential future changes in size and location of potential habitats of marine species during the 21st century in a large, eutrophicated brackish sea (the Baltic Sea, northern Europe).

Submarine canyons can facilitate the transfer of land‐derived organic matter to the deep sea. Here, we investigated links between variability in organic matter availability from land and marine sources and infauna communities in two contrasting canyon systems off New Zealand and used stable isotope analyses to identify potential food sources of benthic invertebrates. Kaikōura Canyon, a steep, short

Increased input of terrigenous matter and pollution into coastal marine ecosystems results in both a decline in benthic irradiance and an influx of nutrients. Though low light conditions have been demonstrated to have adverse effects on benthic primary producers, associated increases in nutrients may alleviate some of this stress by enhancing growth and productivity. We examined the interactive effect

Awareness of groundwater‐borne dissolved inorganic phosphorus (DIP) loadings into lakes and its role in lake eutrophication is increasing, albeit DIP of natural origin is often ignored. Release of geogenic DIP from an adjacent aquifer and its transport with groundwater into a eutrophic lake is described by combining hydrogeochemical data collected in this study (sampling of piezometers, hydrogeochemical