Methane ebullition (bubbling) from lake sediments is an important methane flux into the atmosphere. Previous studies have focused on the open-water season, showing that temperature variations, pressure fluctuations, and wind-induced currents can affect ebullition. However, ebullition surveys during the ice-cover are rare despite the prevalence of seasonally ice-covered lakes, and the factors controlling

Short-term, sublethal response variables are increasingly used to provide rapid indications of whole organism responses to future climate conditions. Accumulating evidence suggests, however, that these response variables may not consistently reflect whole organism responses which manifest over longer time scales. Here, we consider the effect of moderate warming on longer-term whole organism fitness

Widespread long-term increases in dissolved organic carbon (DOC) concentrations (i.e., “browning”) have been observed in many lakes, but the ecological consequences are poorly understood. Some studies suggest a unimodal relationship between DOC and primary productivity, with peak productivity at intermediate DOC concentrations. This peak is hypothesized to result from the tradeoff between light absorbing

Large solitary ascidians, like Herdmania grandis (Heller), can dominate the benthic substrates of subtropical and temperate reefs; however, their influence on nitrogen cycling, particularly nitrous oxide (N2O) production, is unknown. Here, we incubated individual H. grandis and compared fluxes of dissolved inorganic and gaseous nitrogen species to fluxes from reef sediments. Nitrous oxide production

The Great Barrier Reef World Heritage Area in Queensland, Australia contains globally significant seagrasses supporting key ecosystem services, including habitat and food for threatened populations of dugong and turtle. We compiled 35 years of data in a spatial database, including 81,387 data points with georeferenced seagrass and species presence/absence, depth, dominant sediment type, and collection

Increasing chloride concentrations threaten freshwater zooplankton. We questioned the protectiveness of the Canadian Water Quality Guideline for chloride because it is based on individual species studied under laboratory conditions and does not account for potential interactive factors, such as nutrient concentration. We exposed plankton communities to 30 chloride concentration increments for 6 weeks

Carbon is not only the foundation of all life on our planet, but also an element that persists in detrital material long after living organisms die. Quantifying the relative amount of living and nonliving carbon in suspended particles in the ocean is challenging and rarely done; yet it is key to understanding the fate of organic matter and informing food web models. Here, we use particulate adenosine-5′-triphosphate

Biological invasion and environmental change pose major threats to ecosystems. While long-term ecological change is commonly evaluated through sediment cores in lakes, it is generally not feasible for smaller ponds, and spatial resolution is limited. Here, we analyze pond diatom communities collected during Shackleton's Nimrod expedition at Cape Royds, Antarctica, to compare with the same waterbodies

Primary production (PP) is fundamental to ocean biogeochemistry, but challengingly variable. Satellite models are unique tools for investigating PP, but are difficult to compare and validate because of the scale separation between in situ and remote measurements, which also are rarely coincident. Here, I argue that satellite estimates should be log-skew-normally distributed, because of this scale separation

Understanding how altered temperature regimes affect harmful cyanobacterial bloom formation is essential for managing aquatic ecosystems amidst ongoing climate warming. This is difficult because algal performance can depend on both current and past environments, as plastic physiological changes (acclimation) may lag behind environmental change. Here, we investigate how temperature variation on sub-weekly

Sea urchins are key grazers in coastal seas, where they can survive a variety of conditions and diets, enhancing their ecological impact on kelp forests and other ecosystems. Using 16S rRNA gene sequencing, we characterized bacterial communities associated with guts of the two dominant sea urchin species in southern California, the red urchin Mesocentrotus franciscanus, and the purple urchin Strongylocentrotus

Understanding what limits the growth of marine copepods is important for modeling food web dynamics and biogeochemical cycles in the ocean. We use a state‐of‐the‐art stoichiometric model that explicitly represents metabolic physiology to examine the roles of food quantity vs. quality in limiting the growth of these animals. The model predicts that the crossover from C‐ to N‐limitation occurs at food

Lakes and reservoirs collectively contribute significant amounts of methane (CH4) to the global atmosphere. If CH4 production were not at least partially balanced by consumption (oxidation) in most of these systems, they could potentially emit an order of magnitude or more CH4. The impacts of environmental drivers such as trophic status, temperature, and latitude on CH4 production, CH4 oxidation, and

Aquatic primary productivity produces oxygen (O2) and consumes carbon dioxide (CO2) in a ratio of ~1.2. However, in aquatic ecosystems, dissolved CO2 concentrations can be low, potentially limiting primary productivity. Here, results show that a large drainage basin maintains its highest levels of gross primary productivity (GPP) when dissolved CO2 is diminished or undetectable due to photosynthetic

Marine picophytoplankton is the most abundant photosynthetic group on Earth; however, it is still underrepresented in dynamic ecosystem models. Major constraints for understanding its role in the ecosystem at a global scale are sparse data and lack of a baseline description of its distribution. Here, we present three datasets to assess the global abundance of the principal groups of picophytoplankton

The concentrations of conservative solutes in seepage lakes are determined by the relative inputs of precipitation vs. groundwater. In areas of road salt application, seepage lakes may be at high risk of salinization depending on groundwater flow. Here, we revisit a 1992 analysis on the salinization of Sparkling Lake, a deep seepage lake in Northern Wisconsin. The original analysis predicted a rapid

Despite long‐term analyses of lake ice phenology globally, comparatively little is known about high‐elevation lakes, for which climate shifts are thought to be occurring faster than at lower elevations. Using a 36‐yr dataset (1983–2018) on alpine lakes (> 3000 m ASL) from the Green Lakes Valley, Colorado (GLV), we found that ice‐cover duration decreased by an average of ~ 24 d, due to both earlier

Dissolved organic matter (DOM) represents a mixture of organic molecules that vary due to different source materials and degree of processing. Characterizing how DOM composition evolves along the aquatic continuum can be difficult. Using a size‐exclusion chromatography technique (liquid chromatography‐organic carbon detection [LC‐OCD]), we assessed the variability in DOM composition from both surface

Plastic is entering the world's oceans at an unprecedented rate impacting the functioning of the natural marine environment. Yet little consideration has been given to the potential of carbon (C) in the form of plastic (Cplas) to augment the marine carbon system. Here it is shown that Cplas is an integral part of the anthropogenic marine C cycle. Annually, 7.8 ± 1.73 Mt of Cplas is deposited at the

Sea‐level rise (SLR) is expected to compromise coastal wastewater infrastructure (WIS) via groundwater inundation (GWI). We conducted a field‐based study in urban Honolulu, Hawai'i using spring tides as a proxy for future sea levels to quantify the hydrologic connection of WIS. This study focused on two possible pathways: (1) direct GWI of WIS and subsequent discharge into the coastal ocean and (2)

Shifts in marine species distributions are occurring rapidly in response to climate change, yet predicted rates of change are partly dependent on the data used to estimate species distributions. While pelagic fishes are known to respond to dynamic oceanographic variables, static topographic features can also regulate their distributions, yet the effect of topography on rates of range shifts remains

As global climates shift, coastal systems experience changes that alter function within the tidal zone. However, it remains uncertain how changes in tidal extent and magnitude will alter coastal biogeochemical cycling. We present high‐frequency data collected in situ along two transects across a tidal creek and floodplain to capture how vertical and lateral connectivity changes act as biogeochemical

Omnia uno tempore erant agenda (All things were to be done at one time) — Julius Caesar on how to deal with the challenges of multiple and complex operations. —Thorne 2007. The universe of scholarly publishing includes more than 30,000 peer‐reviewed journals in the sciences and humanities (Ware and Mabe 2015), approximately 250 of which cover the aquatic sciences. Establishing a new journal within

Chlorophyll a (Chl a) observations from satellites exhibit a unimodal seasonal variation in the open Black Sea that peaks during winter, which has led to the hypothesis that phytoplankton production is sustained by convective mixing of nitrate from deeper layers. We compiled in situ carbon‐to‐Chl a ratios for the entire year, displaying an expected seasonal pattern ranging from 46 in February to 195 mg C mg Chl−1

Phytoplankton iron contents (i.e., quotas) directly link biogeochemical cycles of iron and carbon and drive patterns of nutrient limitation, recycling, and export. Ocean biogeochemical models typically assume that iron quotas are either static or controlled by dissolved iron availability. We measured iron quotas in phytoplankton communities across nutrient gradients in the Pacific Ocean and found that

Runoff containing road salt (sodium chloride, NaCl) causes the salinization of inland freshwaters, with potentially severe impacts on aquatic species. We performed a mesocosm experiment to test the effects of salinization on plankton community structure in an oligotrophic mountain lake with a limited history of elevated salt concentrations. We exposed plankton communities to a gradient of 30 salt concentrations

We report an assessment for determining the contribution by diatoms to community productivity and respiration within a coastal benthic ecosystem with multiple autotrophs. During summer, cores of open sediment and seagrass habitat were collected from a lagoon within the Northern Gulf of Mexico. Cores were maintained in an outdoor mesocosm. Germanic acid, an inhibitor of diatom cell division, was added

The database on ocean primary productivity comprises over two decades (1985–2008) of data that the authors have participated in collecting, using the assimilation of inorganic 14C through photosynthesis, in incubations carried out in situ. The dataset is perhaps unique in that it uses, overwhelmingly, consistent methodology while covering a wide geographic range. Ancillary data are included. Using

Knowledge of species trophic position (TP) is an essential component of ecosystem management. Determining TP from stable nitrogen isotopes (δ15N) in predators requires understanding how these tracers vary across environments and how they relate to predator isotope composition. We used two seal species as a model for determining TP across large spatial scales in the Arctic. δ15N in seawater nitrate

Scientific Significance Statement Generation of and access to scientific information have traditionally been limited to those with privilege or power. The internet, and the development of Wikipedia, has revolutionized the way information is shared by allowing everyone connected to the internet to generate and access content. However, the scientific community has not taken full advantage of this information

Continental margin sediments are important sites of marine nitrogen cycling and potential contributors to atmospheric N2O emissions. We employed trace‐level N2O microsensors to measure vertical N2O profiles at submillimeter resolutions in intact cores from outer continental margin sediments underlying the NE Pacific oxygen minimum zone. We used mathematical modeling to estimate depth‐dependent rates

Tidal freshwater marshes (TFMs) are threatened by seawater intrusion, which can affect microbial communities and alter biogeochemical processes. Here, we report on a long‐term, large‐scale manipulative field experiment that investigated continuous (press) and episodic (pulse, 2 months/yr) inputs of brackish water on microbial communities in a TFM. After 2.5 yr, microbial diversity was lower in press

Lakes and reservoirs globally produce large quantities of methane and carbon dioxide in their sediments, which accumulate in the hypolimnia (bottom waters) during thermally stratified conditions. A key parameter controlling hypolimnetic greenhouse gas concentrations is dissolved oxygen. Land use and climate change have increased hypolimnetic anoxia worldwide in lakes and reservoirs, which is expected

The increasing availability of high‐frequency freshwater ecosystem metabolism data provides an opportunity to identify links between metabolic regimes, as gross primary production and ecosystem respiration patterns, and consumer energetics with the potential to improve our current understanding of consumer dynamics (e.g., population dynamics, community structure, trophic interactions). We describe

Mangroves have the capacity to sequester organic carbon (Corg) in their sediments permanently. However, the carbon budget of mangroves is also affected by the total alkalinity (TA) budget. Principally, TA emitted from carbonate sediment dissolution is a perennial sink of atmospheric CO2. The assessment of the TA budget of mangrove carbonate sediments in the Red Sea revealed a large TA emission of 403 ± 17 mmol m−2

Estuaries regulate transport of dissolved organic carbon (DOC) from land to ocean. Export of terrestrial DOC from coastal watersheds is exacerbated by increasing major rainfall and storm events and human activities, leading to pulses of DOC that are shunted through rivers downstream to estuaries. Despite an upward trend of extreme events, the fate of the pulsed terrestrial DOC in estuaries remains

Widespread increases in dissolved organic matter (DOM) concentration across northern lakes can alter rates of primary production by increasing nutrient availability and decreasing light availability. These dual effects of DOM generate a unimodal relationship in pelagic primary production and primary producer biomass among lakes over a gradient of DOM concentration. However, the responses of benthic

Incidence of elevated harmful algal blooms and concentrations of microcystin are increasing globally as a result of human‐mediated changes in land use and climate. However, few studies document changes in the seasonal and interannual concentrations of microcystin in lakes. Here, we modeled 11 yr of biweekly microcystin data from six lakes to characterize the seasonal patterns in microcystin concentration

The fate of organic matter (OM) in the deep ocean remains enigmatic, with little understood regarding the flux and its utilization by deep food webs. We used compound‐specific nitrogen stable isotope ratios of source amino acids measured in particle size classes and deep zooplankton (700–1500 m) to determine the contribution of small (0.7–53 μm) vs. large particles (> 53 μm) to their diet at four sites

Scientific Significance Statement One of the most common editorial refrains, regardless of discipline, is “this needs to be tighter.” It typically means too many words and ideas are jumbled together and the underlying point is obscure. The writing is not concise. But, improving conciseness is difficult because the problem is caused by a host of factors that are easily overlooked, especially by early

Here, we investigate the importance of net CH4 production and emissions in the carbon (C) budget of a small productive lake by monitoring CH4, CO2, and O2 for two consecutive years. During the study period, the lake was mostly a net emitter of both CH4 and CO2, while showing positive net ecosystem production. The analyses suggest that during the whole study period, 32% ± 26% of C produced by net ecosystem

It has been widely proposed that increasing global temperatures will promote the geographic spread of invasive species, yet few studies have examined the effects of increasing temperatures on existing populations of invaders. Here, we examine temperature trends across a 70‐year series of daily records from the lower Columbia River (Washington and Oregon), and assess the correlation between interannual

Resting stages are reported for several unicellular eukaryotes including diatoms that can produce spores or resting cells. These stages represent a repository of diversity in sediments but the factors that induce their formation are elusive. We investigated spore formation in the marine diatom Chaetoceros socialis. Our results confirm that nitrogen starvation is an effective experimental trigger for

Iron and temperature are important drivers controlling phytoplankton growth in the Southern Ocean (SO). Most studies examining phytoplankton responses to these variables consider them independently, testing responses to changing temperature under constant iron and vice versa. Consequently, we lack a phenomenological and mechanistic understanding of how concurrent changes in these variables influence

Viruses are important drivers in the cycling of carbon and nutrients in aquatic ecosystems. Since viruses are obligate parasites, their production completely depends on growth and metabolism of hosts and therefore can be affected by climate change. Here, we investigated if warming (+4°C) can change the outcome of viral infections in a natural freshwater virus community over a 5‐month period in a mesocosm

We assessed the prevalence and causes of sediment phosphorus (P) release within urban stormwater ponds, a process that may reduce P removal by sedimentation. Data collected from surface water of 98 urban stormwater ponds in Minnesota showed that nearly 40% had median summer total P concentrations in excess of average stormwater runoff (0.38 mg L−1), implying effects of internal loading. We sampled

Surface‐ocean mixing creates dynamic light environments with predictable effects on phytoplankton growth but unknown consequences for predation. We investigated how variations in average mixed‐layer (ML) irradiance shaped plankton trophic dynamics by incubating a Northwest‐Atlantic plankton community for 4 days at high (H) and low (L) light, followed by exposure to either sustained or reversed light

Characterizing patterns in the microbial communities associated with canopy‐forming kelps is critical to understanding the mechanisms shaping macroalgal microbiomes. Using 16S rRNA gene sequencing, we characterized bacterial and archaeal communities associated with giant kelp in the Santa Barbara Channel. Our results indicate that kelp‐associated microbial communities are altered in the presence of

Marine dissolved organic matter (DOM) is a massive elemental pool on Earth and is thought to consist of a chemically complex mixture of molecules. Part of marine DOM is fluorescent (FDOM) and includes humic‐like compounds. The chemical composition of, and biochemical pathways that yield, autochthonous humic‐like FDOM in the ocean is largely unknown. Inspired by medical and biochemical research detailing

Concentrations of phycocyanin, a pigment of Cyanobacteria, were measured at 1‐min intervals during the ice‐free seasons of 2008–2018 by automated sensors suspended from a buoy at a central station in Lake Mendota, Wisconsin, U.S.A. In each year, stochastic‐dynamic models fitted to time series of log‐transformed phycocyanin concentration revealed two alternative stable states and random factors that

Scientific Significance Statement Interannual variability is a pervasive feature of aquatic ecosystems. This variability results from short‐ and long‐term dynamics of biotic and abiotic origin, inclusive of multiannual variability and long‐term trends. Although understanding short‐term variability and forecasting directional change are important research efforts, far less attention has been paid to

Bottom trawling and eutrophication are large stressors that are critically coupled. Here we show, using a before‐after control‐effect design, the significant reduction in denitrification as a result of experimental bottom trawling in a shallow coastal system. Trawl disturbance destroys the complex three‐dimensional redox structures in surface sediments that maximize denitrification potential, resulting

Metabolic stoichiometry predicts that dissolved oxygen (O2) and carbon dioxide (CO2) in aquatic ecosystems should covary inversely; however, field observations often diverge from theoretical expectations. Here, we propose a suite of metrics describing this O2 and CO2 decoupling and introduce a conceptual framework for interpreting these metrics within aquatic ecosystems. Within this framework, we interpret

Limnologists generally sample during the day. Consequently, many estimates of lake ecosystem processes are derived from daytime samples. Zooplankton, which play critical roles in many such processes, are typically sampled during the day in the pelagic zone, although they commonly exhibit diel vertical and horizontal migration. Demographic estimates using day pelagic sampling may be biased depending

Sulfur (S) is a major heteroatom in organic matter. This project evaluated spatial variability in the concentration and molecular‐level composition of organic sulfur along gradients of depth and latitude. We measured the concentration of total organic sulfur (TOS) directly from whole seawater. Our data reveal high variability in organic sulfur, relative to established variability in total organic carbon

The effect of photomineralization on the carbon cycle in a eutrophic, semiarid estuary (Baffin Bay, Texas) was investigated using closed‐system incubations. Photochemical production rate of dissolved inorganic carbon ranged from 0.16 to 0.68 μM hr−1, with a daily removal of 0.3∼1.5% of the standing stock of dissolved organic carbon (DOC). The photomineralization rate was negatively correlated with

Planktivorous pelagic fish are susceptible to accumulating microplastics (MP), which have the same size range as their prey and accumulate in their feeding and spawning grounds. We analyzed stomach contents of pelagic fish (European sardine, horse mackerel, anchovy, chub mackerel, Atlantic mackerel, and bogue) from Atlanto‐Iberian waters to investigate the relationship between MP ingestion, their diet

Microorganisms drive the biogeochemical cycles that link abiotic and biotic processes in the aqueous environment and are intricately associated with plastic debris. The presence of microplastics in water and sediment introduces new concerns as small particle size allows for increased pathways of microplastics in the food web and element cycles. In this review, we present the current state of knowledge

Spatial and temporal variation in thermal conditions are important dimensions of aquatic landscapes, yet we do not understand how this heterogeneity will respond to climate change. Snowpack in many regions is declining but impacts on aquatic thermal regimes remain poorly understood. Our analyses of summer stream temperatures across a complex river basin in southwest Alaska show that loss of snowpack

Storms are infrequent, intense, physical forcing events that represent a potentially significant driver of ocean ecosystems. The objective of this study was to assess changes in water column structure and turbulent fluxes caused by storms using an autonomous underwater glider, as well as the chlorophyll a (Chl a) response to the altered physical environment. The glider was able to measure throughout