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Conjugative type IV secretion systems enable bacterial antagonism that operates independently of plasmid transfer Commun. Biol. (IF 5.9) Pub Date : 2024-04-25 Lois Gordils-Valentin, Huanrong Ouyang, Liangyu Qian, Joshua Hong, Xuejun Zhu
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Multifaceted regulation of siderophore synthesis by multiple regulatory systems in Shewanella oneidensis Commun. Biol. (IF 5.9) Pub Date : 2024-04-25 Peilu Xie, Yuanyou Xu, Jiaxin Tang, Shihua Wu, Haichun Gao
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Single-cell RNA sequencing reveals the cellular and molecular heterogeneity of treatment-naïve primary osteosarcoma in dogs Commun. Biol. (IF 5.9) Pub Date : 2024-04-24 Dylan T. Ammons, Leone S. Hopkins, Kathryn E. Cronise, Jade Kurihara, Daniel P. Regan, Steven Dow
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Genome-wide CRISPR screens identify the YAP/TEAD axis as a driver of persister cells in EGFR mutant lung cancer Commun. Biol. (IF 5.9) Pub Date : 2024-04-24 Matthias Pfeifer, Jonathan S. Brammeld, Stacey Price, James Pilling, Deepa Bhavsar, Anca Farcas, Jessica Bateson, Anjana Sundarrajan, Ricardo J. Miragaia, Nin Guan, Stephanie Arnold, Laiba Tariq, Michael Grondine, Sarah Talbot, Maria Lisa Guerriero, Daniel J. O’Neill, Jamie Young, Carlos Company, Shanade Dunn, Hannah Thorpe, Matthew J. Martin, Kimberly Maratea, Daniel Barrell, Miika Ahdesmaki, Jerome
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Dopamine improves defective cortical and muscular connectivity during bilateral control of gait in Parkinson’s disease Commun. Biol. (IF 5.9) Pub Date : 2024-04-24 Paulo Cezar Rocha dos Santos, Benedetta Heimler, Or Koren, Tamar Flash, Meir Plotnik
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C-C motif chemokine receptor 2 and 7 synergistically control inflammatory monocyte recruitment but the infecting virus dictates monocyte function in the brain Commun. Biol. (IF 5.9) Pub Date : 2024-04-24 Clayton W. Winkler, Alyssa B. Evans, Aaron B. Carmody, Justin B. Lack, Tyson A. Woods, Karin E. Peterson
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Multimodal joint deconvolution and integrative signature selection in proteomics Commun. Biol. (IF 5.9) Pub Date : 2024-04-24 Yue Pan, Xusheng Wang, Jiao Sun, Chunyu Liu, Junmin Peng, Qian Li
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Multiscale X-ray phase-contrast CT unveils the evolution of bile infarct in obstructive biliary disease Commun. Biol. (IF 5.9) Pub Date : 2024-04-23 Xiaohong Xin, Jianbo Jian, Xu Fan, Beining Qi, Yuanyuan Zhao, Wenjuan Lv, Yuqing Zhao, Xinyan Zhao, Chunhong Hu
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Detection of ribonucleotides embedded in DNA by Nanopore sequencing Commun. Biol. (IF 5.9) Pub Date : 2024-04-23 Lavinia Grasso, Adriano Fonzino, Caterina Manzari, Tommaso Leonardi, Ernesto Picardi, Carmela Gissi, Federico Lazzaro, Graziano Pesole, Marco Muzi-Falconi
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Adipocyte-derived exosomes from obstructive sleep apnoea rats aggravate MASLD by TCONS_00039830/miR-455-3p/Smad2 axis Commun. Biol. (IF 5.9) Pub Date : 2024-04-23 Li Yang, Yan He, Shijie Liu, Lulu Gan, Qing Ni, Anni Dai, Changhuan Mu, Qian Liu, Hongyan Chen, Hongying Lu, Ruixue Sun
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Between hope and reality: treatment of genetic diseases through nucleic acid-based drugs Commun. Biol. (IF 5.9) Pub Date : 2024-04-23 Virginie Baylot, Thi Khanh Le, David Taïeb, Palma Rocchi, Laurence Colleaux
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Revealing the mechanisms of semantic satiation with deep learning models Commun. Biol. (IF 5.9) Pub Date : 2024-04-22 Xinyu Zhang, Jing Lian, Zhaofei Yu, Huajin Tang, Dong Liang, Jizhao Liu, Jian K. Liu
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Disulfiram treatment suppresses antibody-producing reactions by inhibiting macrophage activation and B cell pyrimidine metabolism Commun. Biol. (IF 5.9) Pub Date : 2024-04-22 Weili Chen, Etsuko Toda, Kazuhiro Takeuchi, Yurika Sawa, Kyoko Wakamatsu, Naomi Kuwahara, Arimi Ishikawa, Yuri Igarashi, Mika Terasaki, Shinobu Kunugi, Yasuhiro Terasaki, Kazuhiko Yamada, Yuya Terashima, Akira Shimizu
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Intranasal oxytocin suppresses seizure-like behaviors in a mouse model of NGLY1 deficiency Commun. Biol. (IF 5.9) Pub Date : 2024-04-22 Yukimasa Makita, Makoto Asahina, Reiko Fujinawa, Hiroshi Yukitake, Tadashi Suzuki
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A viral assembly inhibitor blocks SARS-CoV-2 replication in airway epithelial cells Commun. Biol. (IF 5.9) Pub Date : 2024-04-22 Li Du, Fred Deiter, Mohamed S. Bouzidi, Jean-Noël Billaud, Graham Simmons, Prerna Dabral, Suganya Selvarajah, Anuradha F. Lingappa, Maya Michon, Shao Feng Yu, Kumar Paulvannan, Balaji Manicassamy, Vishwanath R. Lingappa, Homer Boushey, John R. Greenland, Satish K. Pillai
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Single-cell T-cell receptor repertoire profiling in dogs Commun. Biol. (IF 5.9) Pub Date : 2024-04-22 My H. Hoang, Zachary L. Skidmore, Hans Rindt, Shirley Chu, Bryan Fisk, Jennifer A. Foltz, Catrina Fronick, Robert Fulton, Mingyi Zhou, Nathan J. Bivens, Carol N. Reinero, Todd A. Fehniger, Malachi Griffith, Jeffrey N. Bryan, Obi L. Griffith
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Salience network connectivity is altered in 6-week-old infants at heightened likelihood for developing autism Commun. Biol. (IF 5.9) Pub Date : 2024-04-22 Tawny Tsang, Shulamite A. Green, Janelle Liu, Katherine Lawrence, Shafali Jeste, Susan Y. Bookheimer, Mirella Dapretto
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Selective deforestation and exposure of African wildlife to bat-borne viruses Commun. Biol. (IF 5.9) Pub Date : 2024-04-22 Pawel Fedurek, Caroline Asiimwe, Gregory K. Rice, Walter J. Akankwasa, Vernon Reynolds, Catherine Hobaiter, Robert Kityo, Geoffrey Muhanguzi, Klaus Zuberbühler, Catherine Crockford, Regina Z. Cer, Andrew J. Bennett, Jessica M. Rothman, Kimberly A. Bishop-Lilly, Tony L. Goldberg
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Leukemia circulation kinetics revealed through blood exchange method Commun. Biol. (IF 5.9) Pub Date : 2024-04-20 Alex B. Miller, Felicia H. Rodriguez, Adam Langenbucher, Lin Lin, Christina Bray, Sarah Duquette, Ye Zhang, Dan Goulet, Andrew A. Lane, David M. Weinstock, Michael T. Hemann, Scott R. Manalis
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Rummagene: massive mining of gene sets from supporting materials of biomedical research publications Commun. Biol. (IF 5.9) Pub Date : 2024-04-20 Daniel J. B. Clarke, Giacomo B. Marino, Eden Z. Deng, Zhuorui Xie, John Erol Evangelista, Avi Ma’ayan
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Differences in diacylglycerol acyltransferases expression patterns and regulation cause distinct hepatic triglyceride deposition in fish Commun. Biol. (IF 5.9) Pub Date : 2024-04-19 Xiaojun Xiang, Renlei Ji, Shangzhe Han, Xiang Xu, Si Zhu, Yongnan Li, Jianlong Du, Kangsen Mai, Qinghui Ai
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Single-cell transcriptomics unveil profiles and interplay of immune subsets in rare autoimmune childhood Sjögren’s disease Commun. Biol. (IF 5.9) Pub Date : 2024-04-19 Myung-Chul Kim, Umasankar De, Nicholas Borcherding, Lei Wang, Joon Paek, Indraneel Bhattacharyya, Qing Yu, Ryan Kolb, Theodore Drashansky, Akaluck Thatayatikom, Weizhou Zhang, Seunghee Cha
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Longitudinal microstructural changes in 18 amygdala nuclei resonate with cortical circuits and phenomics Commun. Biol. (IF 5.9) Pub Date : 2024-04-18 Karam Ghanem, Karin Saltoun, Aparna Suvrathan, Bogdan Draganski, Danilo Bzdok
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A chromosome-level genome assembly for the amphibious plant Rorippa aquatica reveals its allotetraploid origin and mechanisms of heterophylly upon submergence Commun. Biol. (IF 5.9) Pub Date : 2024-04-18 Tomoaki Sakamoto, Shuka Ikematsu, Hokuto Nakayama, Terezie Mandáková, Gholamreza Gohari, Takuya Sakamoto, Gaojie Li, Hongwei Hou, Sachihiro Matsunaga, Martin A. Lysak, Seisuke Kimura
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Multiple factors and features dictate the selective production of ct-siRNA in Arabidopsis Commun. Biol. (IF 5.9) Pub Date : 2024-04-18 Feng Li, Wei Yan, Xianli Tang, Huihui Wu, Yajie Pan, Dongdong Lu, Qianyan Ling-hu, Yuelin Liu, Yongqi Liu, Xiehai Song, Muhammad Ali, Liang Fang, Hongwei Guo, Bosheng Li
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Highly pathogenic avian influenza A(H5N1) virus in a common bottlenose dolphin (Tursiops truncatus) in Florida Commun. Biol. (IF 5.9) Pub Date : 2024-04-18 Allison Murawski, Thomas Fabrizio, Robert Ossiboff, Christina Kackos, Trushar Jeevan, Jeremy C. Jones, Ahmed Kandeil, David Walker, Jasmine C. M. Turner, Christopher Patton, Elena A. Govorkova, Helena Hauck, Suzanna Mickey, Brittany Barbeau, Y. Reddy Bommineni, Mia Torchetti, Kristina Lantz, Lisa Kercher, Andrew B. Allison, Peter Vogel, Michael Walsh, Richard J. Webby
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Near-infrared PAINT localization microscopy via chromophore replenishment of phytochrome-derived fluorescent tag Commun. Biol. (IF 5.9) Pub Date : 2024-04-18 Kai Lu, Tetsuichi Wazawa, Tomoki Matsuda, Daria M. Shcherbakova, Vladislav V. Verkhusha, Takeharu Nagai
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Quantifying maternal investment in mammals using allometry Commun. Biol. (IF 5.9) Pub Date : 2024-04-18 Tim E.R.G. Huijsmans, Alexandre Courtiol, Ann Van Soom, Katrien Smits, François Rousset, Jella Wauters, Thomas B. Hildebrandt
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An evolutionary timeline of the oxytocin signaling pathway Commun. Biol. (IF 5.9) Pub Date : 2024-04-17 Alina M. Sartorius, Jaroslav Rokicki, Siri Birkeland, Francesco Bettella, Claudia Barth, Ann-Marie G. de Lange, Marit Haram, Alexey Shadrin, Adriano Winterton, Nils Eiel Steen, Emanuel Schwarz, Dan J. Stein, Ole A. Andreassen, Dennis van der Meer, Lars T. Westlye, Constantina Theofanopoulou, Daniel S. Quintana
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SPADE: spatial deconvolution for domain specific cell-type estimation Commun. Biol. (IF 5.9) Pub Date : 2024-04-17 Yingying Lu, Qin M. Chen, Lingling An
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Cellular geometry and epithelial-mesenchymal plasticity intersect with PIEZO1 in breast cancer cells Commun. Biol. (IF 5.9) Pub Date : 2024-04-17 Choon Leng So, Mélanie Robitaille, Francisco Sadras, Michael H. McCullough, Michael J. G. Milevskiy, Geoffrey J. Goodhill, Sarah J. Roberts-Thomson, Gregory R. Monteith
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The CBS/H2S signalling pathway regulated by the carbon repressor CreA promotes cellulose utilization in Ganoderma lucidum Commun. Biol. (IF 5.9) Pub Date : 2024-04-17 Jiaolei Shangguan, Jinjin Qiao, He Liu, Lei Zhu, Xiaofei Han, Liang Shi, Jing Zhu, Rui Liu, Ang Ren, Mingwen Zhao
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High temperature and humidity in the environment disrupt bile acid metabolism, the gut microbiome, and GLP-1 secretion in mice Commun. Biol. (IF 5.9) Pub Date : 2024-04-17 Song Chen, Zongren Hu, Jianbang Tang, Haipeng Zhu, Yuhua Zheng, Jiedong Xiao, Youhua Xu, Yao Wang, Yi Luo, Xiaoying Mo, Yalan Wu, Jianwen Guo, Yongliang Zhang, Huanhuan Luo
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Genetic barriers more than environmental associations explain Serratia marcescens population structure Commun. Biol. (IF 5.9) Pub Date : 2024-04-17 Lodovico Sterzi, Riccardo Nodari, Federico Di Marco, Maria Laura Ferrando, Francesca Saluzzo, Andrea Spitaleri, Hamed Allahverdi, Stella Papaleo, Simona Panelli, Sara Giordana Rimoldi, Gherard Batisti Biffignandi, Marta Corbella, Annalisa Cavallero, Paola Prati, Claudio Farina, Daniela Maria Cirillo, Gianvincenzo Zuccotti, Claudio Bandi, Francesco Comandatore
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Structural dynamics of Na+ and Ca2+ interactions with full-size mammalian NCX Commun. Biol. (IF 5.9) Pub Date : 2024-04-16 Moshe Giladi, Lukáš Fojtík, Tali Strauss, Benny Da’adoosh, Reuben Hiller, Petr Man, Daniel Khananshvili
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Post-click labeling enables highly accurate single cell analyses of glucose uptake ex vivo and in vivo Commun. Biol. (IF 5.9) Pub Date : 2024-04-16 Masaki Tsuchiya, Nobuhiko Tachibana, Itaru Hamachi
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Co-clustering of EphB6 and ephrinB1 in trans restrains cancer cell invasion Commun. Biol. (IF 5.9) Pub Date : 2024-04-16 Lung-Yu Liang, Niall D. Geoghegan, Michael Mlodzianoski, Andrew Leis, Lachlan W. Whitehead, Minglyanna G. Surudoi, Samuel N. Young, Peter Janes, Doulin Shepherd, Debnath Ghosal, Kelly L. Rogers, James M. Murphy, Isabelle S. Lucet
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The VP53 protein encoded by RNA2 of a fabavirus, broad bean wilt virus 2, is essential for viral systemic infection Commun. Biol. (IF 5.9) Pub Date : 2024-04-16 Myung-Hwi Kim, Boram Choi, Seok-Yeong Jang, Ji-Soo Choi, Sora Kim, Yubin Lee, Suejin Park, Sun-Jung Kwon, Jin-Ho Kang, Jang-Kyun Seo
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Label-free Brillouin endo-microscopy for the quantitative 3D imaging of sub-micrometre biology Commun. Biol. (IF 5.9) Pub Date : 2024-04-15 Salvatore La Cavera, Veeren M. Chauhan, William Hardiman, Mengting Yao, Rafael Fuentes-Domínguez, Kerry Setchfield, Sidahmed A. Abayzeed, Fernando Pérez-Cota, Richard J. Smith, Matt Clark
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Cytoskeletal rearrangement precedes nucleolar remodeling during adipogenesis Commun. Biol. (IF 5.9) Pub Date : 2024-04-15 Evdokiia Potolitsyna, Sarah Hazell Pickering, Aurélie Bellanger, Thomas Germier, Philippe Collas, Nolwenn Briand
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Neural circuits regulating visceral pain Commun. Biol. (IF 5.9) Pub Date : 2024-04-13 Xiaoli Chang, Haiyan Zhang, Shaozong Chen
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Nimble vs. torpid responders to hydration pulse duration among soil microbes Commun. Biol. (IF 5.9) Pub Date : 2024-04-12 Patrick Kut, Ferran Garcia-Pichel
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RORγt inverse agonist TF-S14 inhibits Th17 cytokines and prolongs skin allograft survival in sensitized mice Commun. Biol. (IF 5.9) Pub Date : 2024-04-12 Ahmed Fouda, Mohamed Taoubane Maallah, Araz Kouyoumdjian, Sarita Negi, Steven Paraskevas, Jean Tchervenkov
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New insights into pterosaur cranial anatomy: X-ray imaging reveals palatal structure and evolutionary trends Commun. Biol. (IF 5.9) Pub Date : 2024-04-12 He Chen, Shunxing Jiang, Alexander W. A. Kellner, Xiaolin Wang
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Pseudomonas putida as saviour for troubled Synechococcus elongatus in a synthetic co-culture – interaction studies based on a multi-OMICs approach Commun. Biol. (IF 5.9) Pub Date : 2024-04-12 Franziska Kratzl, Marlene Urban, Jagroop Pandhal, Mengxun Shi, Chen Meng, Karin Kleigrewe, Andreas Kremling, Katharina Pflüger-Grau
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Epidermal retinol dehydrogenases cyclically regulate stem cell markers and clock genes and influence hair composition Commun. Biol. (IF 5.9) Pub Date : 2024-04-12 Kelli R. Goggans, Olga V. Belyaeva, Alla V. Klyuyeva, Jacob Studdard, Aja Slay, Regina B. Newman, Christine A. VanBuren, Helen B. Everts, Natalia Y. Kedishvili
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Life strategy of Antarctic silverfish promote large carbon export in Terra Nova Bay, Ross Sea Commun. Biol. (IF 5.9) Pub Date : 2024-04-11 Clara Manno, Erica Carlig, Pier Paolo Falco, Pasquale Castagno, Giorgio Budillon
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Glutamate production from aerial nitrogen using the nitrogen-fixing bacterium Klebsiella oxytoca Commun. Biol. (IF 5.9) Pub Date : 2024-04-11 Daisuke Yoshidome, Makoto Hidaka, Toka Miyanaga, Yusuke Ito, Saori Kosono, Makoto Nishiyama
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A unified analysis of evolutionary and population constraint in protein domains highlights structural features and pathogenic sites Commun. Biol. (IF 5.9) Pub Date : 2024-04-11 Stuart A. MacGowan, Fábio Madeira, Thiago Britto-Borges, Geoffrey J. Barton
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An abundant bacterial phylum with nitrite-oxidizing potential in oligotrophic marine sediments Commun. Biol. (IF 5.9) Pub Date : 2024-04-11 Rui Zhao, Steffen L. Jørgensen, Andrew R. Babbin
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Zyxin is important for the stability and function of podocytes, especially during mechanical stretch Commun. Biol. (IF 5.9) Pub Date : 2024-04-11 Felix Kliewe, Florian Siegerist, Elke Hammer, Jaafar Al-Hasani, Theodor Rolf Jakob Amling, Jonas Zeno Eddy Hollemann, Maximilian Schindler, Vedran Drenic, Stefan Simm, Kerstin Amann, Christoph Daniel, Maja Lindenmeyer, Markus Hecker, Uwe Völker, Nicole Endlich
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Insights into the molecular mechanism of yellow cuticle coloration by a chitin-binding carotenoprotein in gregarious locusts Commun. Biol. (IF 5.9) Pub Date : 2024-04-11 Nikita A. Egorkin, Eva E. Dominnik, Eugene G. Maksimov, Nikolai N. Sluchanko
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An in vitro CRISPR screen of cell-free DNA identifies apoptosis as the primary mediator of cell-free DNA release Commun. Biol. (IF 5.9) Pub Date : 2024-04-10 Brad. A. Davidson, Adam X. Miranda, Sarah C. Reed, Riley E. Bergman, Justin D. J. Kemp, Anvith P. Reddy, Morgan V. Pantone, Ethan K. Fox, R. Dixon Dorand, Paula J. Hurley, Sarah Croessmann, Ben Ho Park
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Microtubule polarity determines the lineage of embryonic neural precursor in zebrafish spinal cord Commun. Biol. (IF 5.9) Pub Date : 2024-04-10 Clément-Alexis Richard, Carole Seum, Marcos Gonzalez-Gaitan
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Bioluminescence imaging of Cyp1a1-luciferase reporter mice demonstrates prolonged activation of the aryl hydrocarbon receptor in the lung Commun. Biol. (IF 5.9) Pub Date : 2024-04-10 Nicolas Veland, Hannah J. Gleneadie, Karen E. Brown, Alessandro Sardini, Joaquim Pombo, Andrew Dimond, Vanessa Burns, Karen Sarkisyan, Chris Schiering, Zoe Webster, Matthias Merkenschlager, Amanda G. Fisher
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Revealing myopathy spectrum: integrating transcriptional and clinical features of human skeletal muscles with varying health conditions Commun. Biol. (IF 5.9) Pub Date : 2024-04-10 Huahua Zhong, Veronica Sian, Mridul Johari, Shintaro Katayama, Ali Oghabian, Per Harald Jonson, Peter Hackman, Marco Savarese, Bjarne Udd
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Contribution of host species and pathogen clade to snake fungal disease hotspots in Europe Commun. Biol. (IF 5.9) Pub Date : 2024-04-10 Gaëlle Blanvillain, Jeffrey M. Lorch, Nicolas Joudrier, Stanislaw Bury, Thibault Cuenot, Michael Franzen, Fernando Martínez-Freiría, Gaëtan Guiller, Bálint Halpern, Aleksandra Kolanek, Katarzyna Kurek, Olivier Lourdais, Alix Michon, Radka Musilová, Silke Schweiger, Barbara Szulc, Sylvain Ursenbacher, Oleksandr Zinenko, Joseph R. Hoyt
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Genetic associations of risk behaviours and educational achievement Commun. Biol. (IF 5.9) Pub Date : 2024-04-10 Michelle Arellano Spano, Tim T. Morris, Neil M. Davies, Amanda Hughes
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Cranial functional specialisation for strength precedes morphological evolution in Oviraptorosauria Commun. Biol. (IF 5.9) Pub Date : 2024-04-10 Luke E. Meade, Michael Pittman, Amy Balanoff, Stephan Lautenschlager
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State-dependent binding of cholesterol and an anionic lipid to the muscle-type Torpedo nicotinic acetylcholine receptor Commun. Biol. (IF 5.9) Pub Date : 2024-04-10 Anna Ananchenko, Rui Yan Gao, François Dehez, John E. Baenziger