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Genome-wide identification and expression analysis of the Citrus malectin domain-containing receptor-like kinases in response to arbuscular mycorrhizal fungi colonization and drought
Horticulture, Environment, and Biotechnology ( IF 2.5 ) Pub Date : 2020-08-17 , DOI: 10.1007/s13580-020-00273-3
Chun Luo , Qiaofeng Sun , Fei Zhang , Dejian Zhang , Chunyan Liu , Qiangsheng Wu , Bo Shu

Malectin-like domain-containing receptor-like kinases (MRLKs) compose a big and diverse protein family in plants that plays significant roles in biotic and abiotic stress response. However, the MRLK family members in Citrus, as well as their roles during drought stress (abiotic stress) and arbuscular mycorrhizal fungi (AMF) colonization, remain relatively unknown. In the present study, we characterized the MRLK family genes in Citrus. By analyzing the presence of malectin-like domains and searching through the Citrus genome, we identified 47 CsMRLKs located within nine chromosomes, with most CsMRLKs mainly located on chromosome 1. These 47 CsMRLK family members were classified into 6 subfamilies with distinct malectin domains. Gene expression analysis showed that all 47 CsMRLKs were expressed in the roots and exhibited differential expression patterns. During the drought stress response, CsMRLK6, 7, 8, 9, 10, 11, 19, 25, 26, and 40 were downregulated. AMF colonization downregulated the expression of CsMRLK6, 10, 11, 12, 14, 17, 20, 30, 35, 43, and 47 and upregulated the expression of CsMRLK2, 5, 13, 21, 22, 28, 29, 32, 38, 41, 45, and 46. In addition, AMF colonization and drought stress showed a synergistic effect, in which the downregulated genes became even more weakened and the upregulated genes became even more enhanced. The present study offers useful perception into the Citrus MRLK gene family and its responses in AMF colonization and drought stress.

中文翻译:

响应丛枝菌根真菌定植和干旱的含有柑橘马来素结构域的受体样激酶的全基因组鉴定和表达分析

含有 Malectin 样结构域的受体样激酶 (MRLKs) 在植物中组成一个庞大而多样的蛋白质家族,在生物和非生物胁迫反应中发挥重要作用。然而,柑橘中的 MRLK 家族成员,以及它们在干旱胁迫(非生物胁迫)和丛枝菌根真菌 (AMF) 定殖中的作用,仍然相对未知。在本研究中,我们表征了柑橘中的 MRLK 家族基因。通过分析maleectin样结构域的存在并搜索柑橘基因组,我们确定了位于9条染色体内的47个CsMRLKs,大多数CsMRLKs主要位于1号染色体上。这47个CsMRLK家族成员分为6个具有不同malectin结构域的亚科。基因表达分析表明,所有 47 个 CsMRLKs 均在根中表达并表现出差异表达模式。在干旱胁迫响应期间,CsMRLK6、7、8、9、10、11、19、25、26和40被下调。AMF定植下调CsMRLK6、10、11、12、14、17、20、30、35、43和47的表达,上调CsMRLK2、5、13、21、22、28、29、32、 , 41, 45, 和 46。此外,AMF定植和干旱胁迫显示出协同效应,其中下调基因变得更加弱化,而上调基因变得更加增强。本研究为柑橘 MRLK 基因家族及其在 AMF 定植和干旱胁迫中的反应提供了有用的认识。AMF定植下调CsMRLK6、10、11、12、14、17、20、30、35、43和47的表达,上调CsMRLK2、5、13、21、22、28、29、32、 , 41, 45, 和 46。此外,AMF定植和干旱胁迫表现出协同效应,其中下调基因变得更加弱化,而上调基因变得更加增强。本研究为柑橘 MRLK 基因家族及其在 AMF 定植和干旱胁迫中的反应提供了有用的认识。AMF定植下调CsMRLK6、10、11、12、14、17、20、30、35、43和47的表达,上调CsMRLK2、5、13、21、22、28、29、32、 , 41, 45, 和 46。此外,AMF定植和干旱胁迫表现出协同效应,其中下调基因变得更加弱化,而上调基因变得更加增强。本研究为柑橘 MRLK 基因家族及其在 AMF 定植和干旱胁迫中的反应提供了有用的认识。其中下调的基因变得更加弱化,而上调的基因变得更加增强。本研究为柑橘 MRLK 基因家族及其在 AMF 定植和干旱胁迫中的反应提供了有用的认识。其中下调的基因变得更加弱化,而上调的基因变得更加增强。本研究为柑橘 MRLK 基因家族及其在 AMF 定植和干旱胁迫中的反应提供了有用的认识。
更新日期:2020-08-17
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