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Complete genome sequence of a novel recombinant avian leukosis virus isolated from a three-yellow chicken.
Archives of Virology ( IF 2.5 ) Pub Date : 2020-08-08 , DOI: 10.1007/s00705-020-04764-7
Tao Sun 1 , Ximei Wang 2 , Wei Han 1 , Xiaoling Ma 3 , Weili Yin 1 , Baohai Fang 1 , Xiao Lin 4 , Yang Li 5
Affiliation  

In this study, an avian leukosis virus (ALV) strain (GX-2020-01) was isolated from a three-yellow chicken, and its complete genome was 7570 bp long with the typical organization “5’LTR-gag-pol-env-3’LTR.” Phylogenetic analysis and sequence comparison revealed that it belongs to the ALV-J subgroup. However, the LTR region of GX-2020-01 is highly similar to that of reference strains of ALV-K/E (96.61%-97.10%), demonstrating that this novel isolate is a natural recombinant. The replication efficiency of GX-2020-01 was significantly lower than the previously isolated ALV-J strain (NX0101), indicating that the recombination event might have resulted in slower virus replication, making it harder for it to be detected through routine testing.



中文翻译:

从三只黄色鸡中分离出的新型重组禽白血病病毒的完整基因组序列。

在这项研究中,从三只黄色的鸡中分离出禽白血病病毒(ALV)株(GX-2020-01),其完整基因组长7570 bp,典型组织为“ 5'LTR- gag - pol - env -3'LTR。” 系统发育分析和序列比较表明,它属于ALV-J亚组。但是,GX-2020-01的LTR区域与ALV-K / E参考菌株的LTR区域高度相似(96.61%-97.10%),表明该新型分离株是天然重组体。GX-2020-01的复制效率显着低于以前分离的ALV-J菌株(NX0101),表明重组事件可能导致病毒复制较慢,从而使其难以通过常规测试检测到。

更新日期:2020-10-11
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