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De novo sequence of the mitochondrial genome of Tyrophagus putrescentiae (Acari: Sarcoptiformes) including 22 tRNA sequences and the largest non-coding region.
Experimental and Applied Acarology ( IF 1.8 ) Pub Date : 2020-03-11 , DOI: 10.1007/s10493-020-00477-3
Wei-Xi Fang 1 , Fang-Yuan Dong 2 , En-Tao Sun 1 , Dong-Dong Tao 1 , Yan Wang 1 , Jiao-Yang Xu 1 , Yu Fang 1 , Xue-Bing Zhan 2 , Chang-Jiang Ye 1
Affiliation  

In this study, we de novo sequenced and analyzed the circular mitochondrial genome (mitogenome) of Tyrophagus putrescentiae. It was 14,156 bp long and contained a complete set of 37 genes, contrary to the initial published sequences; it included 22 tRNA sequences and the largest non-coding region. The mtDNA gene order of T. putrescentiae was found to be identical to that of Aleuroglyphus ovatus, Caloglyphus berlesei, and Rhizoglyphus robini (all Acaroidea). Most tRNAs of T. putrescentiae lack at least a D-arm or T-arm. Tyrophagus putrescentiae tRNAs also shared considerable structural and sequence similarity with the tRNAs of other reported Acaroidea species that have the full set of tRNAs. The largest non-coding region was located between trnF and trnS1, and it contained a microsatellite-like (AT)n sequence, short palindromic sequences, and several hairpin loops, as observed in other reported Acaroidea species (excepting Tyrophagus longior).

中文翻译:

腐烂球菌线粒体基因组的新序列(Acari:Sarcoptiformes),包括22个tRNA序列和最大的非编码区。

在这项研究中,我们从头测序和分析的圆形线粒体基因组(线粒体基因),腐食酪螨。它长14156 bp,包含完整的37个基因,与最初公布的序列相反。它包括22个tRNA序列和最大的非编码区。的线粒体基因顺序T.腐食酪螨被认为是等同于的Aleuroglyphus鲹Caloglyphus berlesei,和根螨robini(所有Acaroidea)。腐烂杆菌的大多数tRNA至少缺少一个D臂或T臂。腐霉菌tRNA还与其他报道的具有完整tRNA集合的棘金龟属物种的tRNA具有相当的结构和序列相似性。最大的非编码区位于trnFtrnS1之间,并且它包含微卫星样(AT)n序列,短回文序列和几个发夹环,正如在其他报道的棘形目物种中观察到的那样(除了Tyrophagus longior)。
更新日期:2020-03-11
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