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Autoimmunity-associated intronic SNP (rs2281808) detected by a simple phenotypic assay: Unique case or broader opportunity?
Clinical Immunology ( IF 4.5 ) Pub Date : 2018-12-21 , DOI: 10.1016/j.clim.2018.12.018
Sushmita Sinha 1 , Pranav S Renavikar 1 , Michael P Crawford 1 , Jake W Rodgers 1 , Eva Tsalikian 2 , Michael Tansey 2 , Nitin J Karandikar 1
Affiliation  

Multiple genome-wide association studies have shown that the single-nucleotide polymorphism (SNP) rs2281808 TT variant, present within the signal regulatory protein gamma (SIRPG) gene, is associated with autoimmune diseases, such as type 1 diabetes. SIRPγ is the only SIRP expressed on T cells. The role of SIRPγ in human T-cells or the effect of the TT variant are poorly understood. In this short report, we demonstrate the rather unusual finding that this intronic SNP is associated with a reduction of SIRPγ expression on T cells, both in healthy subjects as well as patients with type 1 diabetes. Using this information, we propose that a simple flow cytometric detection of SIRPγ could be a potential diagnostic testing approach for the presence of SNP in the appropriate clinical context.

中文翻译:

通过简单的表型分析检测到的自身免疫相关的内含子SNP(rs2281808):独特的病例还是广阔的机会?

多个全基因组关联研究表明,信号调节蛋白γ(SIRPG)基因内存在的单核苷酸多态性(SNP)rs2281808 TT变体与自身免疫性疾病(例如1型糖尿病)相关。SIRPγ是在T细胞上表达的唯一SIRP。人们对SIRPγ在人类T细胞中的作用或TT变体的作用了解甚少。在这份简短的报告中,我们证明了一个非常不寻常的发现,即该内含子SNP与健康受试者以及1型糖尿病患者的T细胞SIRPγ表达的降低有关。利用这些信息,我们建议对SIRPγ进行简单的流式细胞术检测可能是在适当的临床背景下针对SNP存在的潜在诊断测试方法。
更新日期:2018-12-21
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