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A Multicenter, Scan-Rescan, Human and Machine Learning CMR Study to Test Generalizability and Precision in Imaging Biomarker Analysis.
Circulation: Cardiovascular Imaging ( IF 6.5 ) Pub Date : 2019-09-24 , DOI: 10.1161/circimaging.119.009214
Anish Bhuva 1, 2 , Wenjia Bai 1 , Clement Lau 1 , Rhodri Davies 1, 2 , Yang Ye 1, 2 , Heeraj Bulluck 1, 2 , Elisa McAlindon 1, 2 , Veronica Culotta 1 , Peter Swoboda 1, 2 , Gabriella Captur 1, 2 , Thomas Treibel 2, 3 , Joao Augusto 2 , Kristopher Knott 2, 4 , Andreas Seraphim 2 , Graham Cole 2, 3 , Steffen Petersen 5 , Nicola Edwards 6 , John Greenwood 7, 8 , Chiara Bucciarelli-Ducci 7 , Alun Hughes 9 , Daniel Rueckert 9 , James Moon 10 , Charlotte Manisty 11
Affiliation  

BACKGROUND Automated analysis of cardiac structure and function using machine learning (ML) has great potential, but is currently hindered by poor generalizability. Comparison is traditionally against clinicians as a reference, ignoring inherent human inter- and intraobserver error, and ensuring that ML cannot demonstrate superiority. Measuring precision (scan:rescan reproducibility) addresses this. We compared precision of ML and humans using a multicenter, multi-disease, scan:rescan cardiovascular magnetic resonance data set. METHODS One hundred ten patients (5 disease categories, 5 institutions, 2 scanner manufacturers, and 2 field strengths) underwent scan:rescan cardiovascular magnetic resonance (96% within one week). After identification of the most precise human technique, left ventricular chamber volumes, mass, and ejection fraction were measured by an expert, a trained junior clinician, and a fully automated convolutional neural network trained on 599 independent multicenter disease cases. Scan:rescan coefficient of variation and 1000 bootstrapped 95% CIs were calculated and compared using mixed linear effects models. RESULTS Clinicians can be confident in detecting a 9% change in left ventricular ejection fraction, with greater than half of coefficient of variation attributable to intraobserver variation. Expert, trained junior, and automated scan:rescan precision were similar (for left ventricular ejection fraction, coefficient of variation 6.1 [5.2%-7.1%], P=0.2581; 8.3 [5.6%-10.3%], P=0.3653; 8.8 [6.1%-11.1%], P=0.8620). Automated analysis was 186× faster than humans (0.07 versus 13 minutes). CONCLUSIONS Automated ML analysis is faster with similar precision to the most precise human techniques, even when challenged with real-world scan:rescan data. Assessment of multicenter, multi-vendor, multi-field strength scan:rescan data (available at www.thevolumesresource.com) permits a generalizable assessment of ML precision and may facilitate direct translation of ML to clinical practice.

中文翻译:


一项多中心、扫描-重新扫描、人类和机器学习 CMR 研究,用于测试成像生物标志物分析的普遍性和精度。



背景技术使用机器学习(ML)对心脏结构和功能进行自动分析具有巨大的潜力,但目前由于通用性差而受到阻碍。传统上,比较是以临床医生为参考,忽略了固有的人类观察者间和观察者内的错误,并确保机器学习无法表现出优越性。测量精度(扫描:重新扫描再现性)解决了这个问题。我们使用多中心、多疾病、扫描:重新扫描心血管磁共振数据集比较了机器学习和人类的精度。方法 110 名患者(5 个疾病类别、5 个机构、2 个扫描仪制造商和 2 个场强)接受了扫描:重新扫描心血管磁共振(96% 在一周内)。在确定了最精确的人体技术后,由专家、经过培训的初级临床医生和经过 599 个独立多中心疾病病例训练的全自动卷积神经网络测量左心室容积、质量和射血分数。使用混合线性效应模型计算并比较扫描:重新扫描变异系数和 1000 个自举 95% CI。结果 临床医生可以自信地检测到左心室射血分数 9% 的变化,其中一半以上的变异系数归因于观察者内部的变异。专家、训练有素的初级扫描和自动扫描:重新扫描精度相似(左心室射血分数,变异系数 6.1 [5.2%-7.1%],P=0.2581;8.3 [5.6%-10.3%],P=0.3653;8.8 [6.1%-11.1%],P=0.8620)。自动分析比人类快 186 倍(0.07 分钟对 13 分钟)。结论 即使面临现实世界扫描:重新扫描数据的挑战,自动化 ML 分析速度更快,精度与最精确的人类技术相似。 多中心、多供应商、多场强扫描的评估:重新扫描数据(可在 www.thevolumesresource.com 上获取)允许对 ML 精度进行普遍评估,并可能有助于将 ML 直接转化为临床实践。
更新日期:2019-09-25
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