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Synthesis, Structure–Activity Relationship Study, Bioactivity, and Nephrotoxicity Evaluation of the Proposed Structure of the Cyclic Lipodepsipeptide Brevicidine B
Journal of Natural Products ( IF 3.3 ) Pub Date : 2024-02-29 , DOI: 10.1021/acs.jnatprod.3c00876
Dennise Palpal-Latoc 1, 2, 3 , Aimee J Horsfall 1, 2, 3 , Alan J Cameron 1, 2, 3 , Georgia Campbell 4 , Scott A Ferguson 4 , Gregory M Cook 4 , Veronika Sander 5 , Alan J Davidson 5 , Paul W R Harris 1, 2, 3 , Margaret A Brimble 1, 2, 3
Affiliation  

The brevicidines represent a novel class of nonribosomal antimicrobial peptides that possess remarkable potency and selectivity toward highly problematic and resistant Gram-negative pathogenic bacteria. A recently discovered member of the brevicidine family, coined brevicidine B (2), comprises a single amino acid substitution (from d-Tyr2 to d-Phe2) in the amino acid sequence of the linear moiety of brevicidine (1) and was reported to exhibit broader antimicrobial activity against both Gram-negative (MIC = 2–4 μgmL–1) and Gram-positive (MIC = 2–8 μgmL–1) pathogens. Encouraged by this, we herein report the first total synthesis of the proposed structure of brevicidine B (2), building on our previously reported synthetic strategy to access brevicidine (1). In agreement with the original isolation paper, pleasingly, synthetic 2 demonstrated antimicrobial activity toward Escherichia coli, Pseudomonas aeruginosa, and Klebsiella pneumoniae (MIC = 4–8 μgmL–1). Interestingly, however, synthetic 2 was inactive toward all of the tested Gram-positive pathogens, including methicillin-resistant Staphylococcus aureus strains. Substitution of d-Phe2 with its enantiomer, and other hydrophobic residues, yields analogues that were either inactive or only exhibited activity toward Gram-negative strains. The striking difference in the biological activity of our synthetic 2 compared to the reported natural compound warrants the re-evaluation of the original natural product for purity or possible differences in relative configuration. Finally, the evaluation of synthetic 1 and 2 in a human kidney organoid model of nephrotoxicity revealed substantial toxicity of both compounds, although 1 was less toxic than 2 and polymyxin B. These results indicate that modification to position 2 may afford a strategy to mitigate the nephrotoxicity of brevicidine.

中文翻译:


环状脂缩肽 Brevicidine B 拟定结构的合成、构效关系研究、生物活性和肾毒性评价



brevicidines 代表了一类新型非核糖体抗菌肽,对高度问题和耐药的革兰氏阴性病原菌具有显着的效力和选择性。最近发现的 brevicidine 家族成员,被命名为 brevicidine B ( 2 ),在 brevicidine ( 1 ) 的线性部分的氨基酸序列中包含单个氨基酸取代(从d -Tyr 2d -Phe 2 ),并被命名为 brevicidine B ( 2 ) 。据报道对革兰氏阴性 (MIC = 2–4 μgmL –1 ) 和革兰氏阳性 (MIC = 2–8 μgmL –1 ) 病原体表现出更广泛的抗菌活性。受此鼓舞,我们在此报告了 brevicidine B ( 2 ) 拟议结构的首次全合成,以我们之前报道的获得 brevicidine ( 1 ) 的合成策略为基础。令人高兴的是,与原始分离纸一致,合成2大肠杆菌铜绿假单胞菌肺炎克雷伯菌具有抗菌活性 (MIC = 4–8 μgmL –1 )。然而有趣的是,synthetic 2对所有测试的革兰氏阳性病原体均无活性,包括耐甲氧西林金黄色葡萄球菌菌株。用其对映体和其他疏水残基取代d -Phe 2 ,产生对革兰氏阴性菌株无活性或仅表现出活性的类似物。 与报道的天然化合物相比,我们的合成2的生物活性存在显着差异,因此需要重新评估原始天然产物的纯度或相对构型可能存在的差异。最后,在人肾类器官肾毒性模型中对合成12的评估显示,这两种化合物均具有显着毒性,尽管1 的毒性低于2和多粘菌素 B。这些结果表明,对位置 2 的修饰可能提供一种减轻毒性的策略。 brevicidine 的肾毒性。
更新日期:2024-02-29
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