Efficient sharing and integration of phenotypic data is crucial for advancing biomedical research and enhancing patient outcomes in precision medicine and public health. To achieve this, the health data community has developed standards to promote the harmonization of variable names and values. However, the use of diverse standards across different research centers can hinder progress. Here we present Convert-Pheno, an open-source software toolkit that enables the interconversion of common data models for phenotypic data such as Beacon v2 Models, CDISC-ODM, OMOP-CDM, Phenopackets v2, and REDCap. Along with the software, we have created a detailed documentation that includes information on deployment and installation.

表型数据的有效共享和整合对于推进生物医学研究和提高精准医学和公共卫生领域的患者治疗效果至关重要。为了实现这一目标，健康数据社区制定了标准来促进变量名称和值的协调。然而，不同研究中心使用不同的标准可能会阻碍进展。在这里，我们介绍 Convert-Pheno，这是一个开源软件工具包，可以实现表型数据的常见数据模型的相互转换，例如 Beacon v2 模型、CDISC-ODM、OMOP-CDM、Phenopackets v2 和 REDCap。除了该软件之外，我们还创建了详细的文档，其中包括有关部署和安装的信息。