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Descending Dysploidy and Bidirectional Changes in Genome Size Accompanied Crepis (Asteraceae) Evolution
Genes ( IF 2.8 ) Pub Date : 2021-09-17 , DOI: 10.3390/genes12091436
Magdalena Senderowicz 1 , Teresa Nowak 1 , Magdalena Rojek-Jelonek 1 , Maciej Bisaga 1 , Laszlo Papp 2 , Hanna Weiss-Schneeweiss 3 , Bozena Kolano 1
Affiliation  

The evolution of the karyotype and genome size was examined in species of Crepis sensu lato. The phylogenetic relationships, inferred from the plastid and nrITS DNA sequences, were used as a framework to infer the patterns of karyotype evolution. Five different base chromosome numbers (x = 3, 4, 5, 6, and 11) were observed. A phylogenetic analysis of the evolution of the chromosome numbers allowed the inference of x = 6 as the ancestral state and the descending dysploidy as the major direction of the chromosome base number evolution. The derived base chromosome numbers (x = 5, 4, and 3) were found to have originated independently and recurrently in the different lineages of the genus. A few independent events of increases in karyotype asymmetry were inferred to have accompanied the karyotype evolution in Crepis. The genome sizes of 33 Crepis species differed seven-fold and the ancestral genome size was reconstructed to be 1 C = 3.44 pg. Both decreases and increases in the genome size were inferred to have occurred within and between the lineages. The data suggest that, in addition to dysploidy, the amplification/elimination of various repetitive DNAs was likely involved in the genome and taxa differentiation in the genus.

中文翻译:


降序异常倍体和基因组大小的双向变化伴随着 Crepis(菊科)进化



Crepis sensu lato 物种中检查了核型和基因组大小的进化。从质体和 nrITS DNA 序列推断出的系统发育关系被用作推断核型进化模式的框架。观察到五个不同的碱基染色体编号( x = 3、4、5、6 和 11)。对染色体数目进化的系统发育分析允许推断x = 6 作为祖先状态,并且下降的异倍体作为染色体碱基数目进化的主要方向。发现衍生的基本染色体编号( x = 5、4和3)在该属的不同谱系中独立且循环地起源。据推测,核型不对称性增加的一些独立事件伴随着Crepis 的核型进化。 33 个Crepis物种的基因组大小相差七倍,祖先基因组大小重建为 1 C = 3.44 pg。据推断,基因组大小的减小和增加都发生在谱系内部和谱系之间。数据表明,除了异倍体之外,各种重复DNA的扩增/消除可能与该属的基因组和分类群分化有关。
更新日期:2021-09-17
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