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Antimicrobial resistance in integrated agroecosystems: State of the science and future opportunities
Journal of Environmental Quality ( IF 2.2 ) Pub Date : 2021-09-16 , DOI: 10.1002/jeq2.20289
Adina C Howe 1 , Michelle L Soupir 1
Affiliation  

As the Journal of Environmental Quality (JEQ) celebrates 50 years of publication, the division of environmental microbiology is one of the newest additions to the journal. During this time, significant advances in understanding of the interconnected microbial community and impact of the microbiome on natural and designed environmental systems have occurred. In this review, we highlight the intractable challenge of antimicrobial resistance (AMR) on humans, animals, and the environment, with particular emphasis on the role of integrated agroecosystems and by highlighting contributions published in JEQ. From early studies of phenotypic resistance of indicator organisms in waters systems to current calls for integrating AMR assessment across “One Health,” publications in JEQ have advanced our understanding of AMR. As we reflect on the state of the science, we emphasize future opportunities. First, integration of phenotypic and molecular tools for assessing environmental spread of AMR and human health risk continues to be an urgent research need for a one health approach to AMR. Second, monitoring AMR levels in manure is recommended to understand inputs and potential spread through agroecosystems. Third, baseline knowledge of AMR levels is important to realize the impact of manure inputs on water quality and public health risk; this can be achieved through background monitoring or identifying the source-related genes or organisms. And finally, conservation practices designed to meet nutrient reduction goals should be explored for AMR reduction potential.

中文翻译:

综合农业生态系统中的抗菌素耐药性:科学现状和未来机遇

作为环境质量杂志(JEQ) 庆祝出版 50 周年,环境微生物学部门是该杂志的最新成员之一。在此期间,在理解相互关联的微生物群落以及微生物组对自然和设计的环境系统的影响方面取得了重大进展。在这篇综述中,我们强调了抗菌素耐药性 (AMR) 对人类、动物和环境的棘手挑战,特别强调了综合农业生态系统的作用,并强调了在 JEQ 上发表的贡献。从对水域系统中指示生物的表型抗性的早期研究到当前要求在“One Health”中整合 AMR 评估的呼吁,JEQ 的出版物促进了我们对 AMR 的理解。当我们反思科学现状时,我们强调未来的机会。首先,用于评估 AMR 环境传播和人类健康风险的表型和分子工具的整合仍然是针对 AMR 的单一健康方法的迫切研究需求。其次,建议监测粪便中的 AMR 水平,以了解投入物和通过农业生态系统的潜在传播。第三,AMR 水平的基线知识对于了解粪便输入对水质和公共卫生风险的影响很重要;这可以通过背景监测或识别与来源相关的基因或生物体来实现。最后,应探索旨在满足减少养分目标的保护措施,以减少 AMR 的潜力。用于评估 AMR 环境传播和人类健康风险的表型和分子工具的整合仍然是针对 AMR 的单一健康方法的迫切研究需求。其次,建议监测粪便中的 AMR 水平,以了解投入物和通过农业生态系统的潜在传播。第三,AMR 水平的基线知识对于了解粪便输入对水质和公共卫生风险的影响很重要;这可以通过背景监测或识别与来源相关的基因或生物体来实现。最后,应探索旨在满足减少养分目标的保护措施,以减少 AMR 的潜力。用于评估 AMR 环境传播和人类健康风险的表型和分子工具的整合仍然是针对 AMR 的单一健康方法的迫切研究需求。其次,建议监测粪便中的 AMR 水平,以了解投入物和通过农业生态系统的潜在传播。第三,AMR 水平的基线知识对于了解粪便输入对水质和公共卫生风险的影响很重要;这可以通过背景监测或识别与来源相关的基因或生物体来实现。最后,应探索旨在满足减少养分目标的保护措施,以减少 AMR 的潜力。AMR 水平的基线知识对于了解粪便输入对水质和公共卫生风险的影响很重要;这可以通过背景监测或识别与来源相关的基因或生物体来实现。最后,应探索旨在满足减少养分目标的保护措施,以减少 AMR 的潜力。AMR 水平的基线知识对于了解粪便输入对水质和公共卫生风险的影响很重要;这可以通过背景监测或识别与来源相关的基因或生物体来实现。最后,应探索旨在满足减少养分目标的保护措施,以减少 AMR 的潜力。
更新日期:2021-09-16
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