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Evaluation of a new assay for nontuberculous mycobacteria species identification in diagnostic material and cultures
Tuberculosis ( IF 3.2 ) Pub Date : 2021-09-03 , DOI: 10.1016/j.tube.2021.102124
Tatiana Smirnova 1 , Vera Ustinova 1 , Sofya Andreevskaya 1 , Elena Larionova 1 , Ekaterina Kiseleva 1 , Larisa Chernousova 1 , Dmitry Varlamov 2 , Dmitry Sochivko 2 , Atadzhan Ergeshov 1
Affiliation  

The purpose of the present study was to evaluate a real-time PCR system for 12 nontuberculous mycobacteria (NTM) species identification developed by Central Tuberculosis Research Institute (CTRI; Moscow, Russia) in cooperation with Syntol LLC (Moscow, Russia). NTM cultures (210 strains, 19 species), Mycobacterium tuberculosis complex (MTBC) cultures (21 strains, 2 species), non-mycobacterial microorganisms (18 strains, 13 species) were used for the first stage of the assay evaluation. Clinical samples (sputum, N = 973) positive for smear microscopy and MTBC/NTM DNA by a PCR-based screening assay collected from 819 patients were used for specificity and sensitivity evaluation. Sensitivity for determining the NTM species directly from diagnostic material was 99.71%, with the specificity of 100%. The sensitivity and specificity for NTM species identification in cultures was 99.67% and 100%, respectively. Both sensitivity and specificity for determining MTBC in cultures was 100%.



中文翻译:

评估诊断材料和培养物中非结核分枝杆菌物种鉴定的新方法

本研究的目的是评估中央结核病研究所(CTRI;俄罗斯莫斯科)与 Syntol LLC(俄罗斯莫斯科)合作开发的用于 12 种非结核分枝杆菌 (NTM) 物种鉴定的实时 PCR 系统。NTM 培养物(210 株,19 种),结核分枝杆菌复合 (MTBC) 培养物(21 株,2 种)、非分枝杆菌微生物(18 株,13 种)用于测定评估的第一阶段。通过从 819 名患者收集的基于 PCR 的筛选试验,涂片镜检和 MTBC/NTM DNA 呈阳性的临床样本(痰,N = 973)用于特异性和敏感性评估。直接从诊断材料中确定 NTM 种类的敏感性为 99.71%,特异性为 100%。培养物中 NTM 物种鉴定的敏感性和特异性分别为 99.67% 和 100%。在培养物中测定 MTBC 的敏感性和特异性均为 100%。

更新日期:2021-09-04
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