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FlexTaxD: flexible modification of taxonomy databases for improved sequence classification
Bioinformatics ( IF 4.4 ) Pub Date : 2021-09-01 , DOI: 10.1093/bioinformatics/btab621
David Sundell 1 , Caroline Öhrman 1 , Daniel Svensson 1, 2 , Edvin Karlsson 1, 2 , Björn Brindefalk 1 , Kerstin Myrtennäs 1 , Jon Ahlinder 1 , Markus H Antwerpen 3 , Mathias C Walter 3 , Mats Forsman 1 , Per Stenberg 1, 2 , Andreas Sjödin 1
Affiliation  

Summary The Flexible Taxonomy Database framework provides a method for modification and merging official and custom taxonomic databases to create improved databases. Using such databases will increase accuracy and precision of existing methods to classify sequence reads. Availability and implementation Source code is freely available at https://github.com/FOI-Bioinformatics/flextaxd and installable through Bioconda.

中文翻译:

FlexTaxD:灵活修改分类数据库以改进序列分类

总结 Flexible Taxonomy Database 框架提供了一种修改和合并官方和自定义分类数据库以创建改进数据库的方法。使用此类数据库将提高现有方法对序列读取进行分类的准确性和精确度。可用性和实施​​源代码可在 https://github.com/FOI-Bioinformatics/flextaxd 免费获得,并可通过 Bioconda 安装。
更新日期:2021-09-01
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