Core Genome Multi-Locus Sequence Typing and Prediction of Antimicrobial Susceptibility Using Whole Genome Sequences of Escherichia coli Bloodstream Infection Isolates,Antimicrobial Agents and Chemotherapy

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Core Genome Multi-Locus Sequence Typing and Prediction of Antimicrobial Susceptibility Using Whole Genome Sequences of Escherichia coli Bloodstream Infection Isolates
Antimicrobial Agents and Chemotherapy ( IF 4.1 ) Pub Date : 2021-08-23 , DOI: 10.1128/aac.01139-21
Ritu Banerjee ₁ , Scott A Cunningham ₂ , Stephan Beisken ₃ , Andreas E Posch ₃ , Brian Johnston ₄ , James R Johnson ₄ , Robin Patel ₂

Affiliation

50 Escherichia coli bloodstream isolates from the clinical laboratory and 12 E. coli isolates referred for PFGE were sequenced, assessed for clonality using cgMLST and evaluated for genomic susceptibility predictions using ARESdb. Sequence typing using ...

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