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Complete genome sequences of infectious spleen and kidney necrosis virus isolated from farmed albino rainbow sharks Epalzeorhynchos frenatum in the United States
Virus Genes ( IF 1.9 ) Pub Date : 2021-07-17 , DOI: 10.1007/s11262-021-01857-6
Samantha A Koda 1 , Kuttichantran Subramaniam 1 , Deborah B Pouder 2 , Roy P Yanong 2 , Salvatore Frasca 3, 4 , Vsevolod L Popov 5 , Thomas B Waltzek 1
Affiliation  

The genus Megalocytivirus includes viruses known to cause significant disease in aquacultured fish stocks. Herein, we report the complete genome sequences of two megalocytiviruses (MCVs) isolated from diseased albino rainbow sharks Epalzeorhynchos frenatum reared on farms in the United States in 2018 and 2019. Histopathological examination revealed typical megalocytivirus microscopic lesions (i.e., basophilic cytoplasmic inclusions) that were most commonly observed in the spleen and kidney. Transmission electron microscopic examination of spleen and kidney tissues from specimens of the 2018 case revealed hexagonally shaped virus particles with a mean diameter of 153 ± 6 nm (n = 20) from opposite vertices and 131 ± 5 nm (n = 20) from opposite faces. Two MCV-specific conventional PCR assays confirmed the presence of MCV DNA in the collected samples. Full genome sequencing of both 2018 and 2019 Epalzeorhynchos frenatus iridoviruses (EFIV) was accomplished using a next-generation sequencing approach. Phylogenomic analyses revealed that both EFIV isolates belong to the infectious spleen and kidney necrosis virus (ISKNV) genotype within the genus Megalocytivirus. This study is the first report of ISKNV in albino rainbow sharks.



中文翻译:

从美国养殖的白化彩虹鲨 Epalzeorhynchos frenatum 中分离出的传染性脾肾坏死病毒的完整基因组序列

The genus Megalocytivirus includes viruses known to cause significant disease in aquacultured fish stocks. Herein, we report the complete genome sequences of two megalocytiviruses (MCVs) isolated from diseased albino rainbow sharks Epalzeorhynchos frenatum reared on farms in the United States in 2018 and 2019. Histopathological examination revealed typical megalocytivirus microscopic lesions (i.e., basophilic cytoplasmic inclusions) that were most commonly observed in the spleen and kidney. Transmission electron microscopic examination of spleen and kidney tissues from specimens of the 2018 case revealed hexagonally shaped virus particles with a mean diameter of 153 ± 6 nm (n = 20) from opposite vertices and 131 ± 5 nm (n = 20) 从相反的面。两种 MCV 特异性常规 PCR 检测证实了收集的样品中存在 MCV DNA。2018 年和 2019 年 Epalzeorhynchos frenatus 虹彩病毒 (EFIV) 的全基因组测序是使用下一代测序方法完成的。Phylogenomic分析显示,这两个EFIV株属于属内的传染性脾肾坏死病毒(ISKNV)基因型Megalocytivirus。这项研究是 ISKNV 在白化彩虹鲨中的第一份报告。

更新日期:2021-07-18
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