The complete mitochondrial (mt) genome of Stereolepis doederleini was sequenced from a specimen collected in a commercial aquarium in Jeju Island. The sequence was 16,513 base pairs in length and, similar to other vertebrate mt genomes, included 37 mt genes and a noncoding control region; the gene order was identical to that of typical vertebrate mt genome. Mitochondrial genome sequences of 17 species from 12 families were used to reconstruct phylogenetic relationships within the order Pempheriformes. The phylogenetic trees were constructed with three methods (neighbor joining [NJ], maximum likelihood [ML], and Bayesian method) using 12 protein coding genes, but not ND6. In all phylogenetic trees, Pempheriformes were clustered into three strongly supported clades. Two Acropomatidae species (Synagrops japonicus in clade-Ⅰ and Doederleinia berycoides in clade-Ⅲ) were polyphyletic; S. japonicus was close to Lateolabracidae and was the sister of Glaucosomatidae + (Pempheridae/(Percophidae+Creediidae)), and D. berycoides was sister to Howellidae + Epigonidae. All phylogenetic trees supported a sister relationship between Creediidae and Percophidae in clade-Ⅰ. Glaucosomatidae formed a sister clade with Pempheridae. The relationships within clade-Ⅱ, which was composed of four families (Pentacerotidae, Polyprionidae, Banjosidae, and Bathyclupeidae), slightly differed between NJ/ML and BI tree topologies. In clade-Ⅲ, the relationships among Howellidae, Epigonidae, and Acropomatidae were strongly supported.

中文翻译：

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斑节对虾线粒体基因组（天疱疮：pr科）和线虫的线粒体系统发育。

从在济州岛的一个商业水族馆中收集的标本中测序出了Stereolepis doederleini的完整线粒体（mt）基因组。该序列长度为16,513个碱基对，与其他脊椎动物mt基因组相似，包括37个mt基因和一个非编码控制区。基因顺序与典型的脊椎动物mt基因组顺序相同。来自12个科的17个物种的线粒体基因组序列被用于重建天疱疮目内的系统发育关系。使用12种蛋白质编码基因而不是ND6，通过三种方法（邻居加入[NJ]，最大似然[ML]和贝叶斯方法）构建了系统发育树。在所有的系统发育树中，天疱疮被聚类为三个有力支撑的进化枝。两种杂食动物科（第一类的日本刺参和第三类的杜氏杜鹃）是多系的。日本血吸虫（S. japonicus）与乳杆菌科（Lateolabracidae）接近，并且是青蝇科+（Pempheridae /（Percophidae + Creediidae））的姐姐，而D. berycoides是Howellidae + Epigonidae的姐姐。所有的系统发育树都支持进化枝Ⅰ中Creediidae和Percophidae之间的姐妹关系。绿尾科与天疱疮科形成了姐妹进化枝。进化枝Ⅱ中的关系由四个科（P科、,科、,科和ida科）组成，在NJ / ML和BI树形拓扑之间略有不同。在Ⅲ类进化枝中，猪elli科，Epi科和e科之间的关系得到了有力的支持。japonicus接近Lateolabracidae，是Glaucosomatidae +（Pempheridae /（Percophidae + Creediidae））的姐妹，而D. berycoides是Howellidae + Epigonidae的姐妹。所有的系统发育树都支持进化枝Ⅰ中Creediidae和Percophidae之间的姐妹关系。绿尾科与天疱疮科形成了姐妹进化枝。进化枝Ⅱ中的关系由四个科（P科、,科、,科和ida科）组成，在NJ / ML和BI树形拓扑之间略有不同。在Ⅲ类进化枝中，猪elli科，Epi科和e科之间的关系得到了有力的支持。japonicus接近Lateolabracidae，是Glaucosomatidae +（Pempheridae /（Percophidae + Creediidae））的姐妹，而D. berycoides是Howellidae + Epigonidae的姐妹。所有的系统发育树都支持进化枝Ⅰ中Creediidae和Percophidae之间的姐妹关系。绿尾科与天疱疮科形成了姐妹进化枝。进化枝Ⅱ中的关系由四个科（P科、,科、,科和ida科）组成，在NJ / ML和BI树形拓扑之间略有不同。在Ⅲ类进化枝中，猪elli科，Epi科和e科之间的关系得到了有力的支持。绿尾科与天疱疮科形成了姐妹进化枝。进化枝Ⅱ中的关系由四个科（P科、,科、,科和ida科）组成，在NJ / ML和BI树形拓扑之间略有不同。在Ⅲ类进化枝中，猪elli科，Epi科和e科之间的关系得到了有力的支持。绿尾科与天疱疮科形成了姐妹进化枝。进化枝Ⅱ中的关系由四个科（P科、,科、,科和ida科）组成，在NJ / ML和BI树形拓扑之间略有不同。在Ⅲ类进化枝中，猪elli科，Epi科和e科之间的关系得到了有力的支持。