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Cutting-Edge Single-Molecule Technologies Unveil New Mechanics in Cellular Biochemistry
Annual Review of Biophysics ( IF 10.4 ) Pub Date : 2021-05-06 , DOI: 10.1146/annurev-biophys-090420-083836
Souradeep Banerjee 1 , Soham Chakraborty 1 , Abhijit Sreepada 1 , Devshuvam Banerji 1 , Shashwat Goyal 1 , Yajushi Khurana 1 , Shubhasis Haldar 1
Affiliation  

Single-molecule technologies have expanded our ability to detect biological events individually, in contrast to ensemble biophysical technologies, where the result provides averaged information. Recent developments in atomic force microscopy have not only enabled us to distinguish the heterogeneous phenomena of individual molecules, but also allowed us to view up to the resolution of a single covalent bond. Similarly, optical tweezers, due to their versatility and precision, have emerged as a potent technique to dissect a diverse range of complex biological processes, from the nanomechanics of ClpXP protease–dependent degradation to force-dependent processivity of motor proteins. Despite the advantages of optical tweezers, the time scales used in this technology were inconsistent with physiological scenarios, which led to the development of magnetic tweezers, where proteins are covalently linked with the glass surface, which in turn increases the observation window of a single biomolecule from minutes to weeks. Unlike optical tweezers, magnetic tweezers use magnetic fields to impose torque, which makes them convenient for studying DNA topology and topoisomerase functioning. Using modified magnetic tweezers, researchers were able to discover the mechanical role of chaperones, which support their substrate proteinsby pulling them during translocation and assist their native folding as a mechanical foldase. In this article, we provide a focused review of many of these new roles of single-molecule technologies, ranging from single bond breaking to complex chaperone machinery, along with the potential to design mechanomedicine, which would be a breakthrough in pharmacological interventions against many diseases.

中文翻译:


尖端的单分子技术揭示了细胞生物化学的新机制

与整体生物物理技术相反,单分子技术扩展了我们单独检测生物事件的能力,后者的结果提供了平均信息。原子力显微镜的最新发展不仅使我们能够区分单个分子的异质现象,而且使我们能够观察到单个共价键的分辨率。同样,由于镊子的多功能性和精确性,它已经成为一种解剖各种复杂生物过程的有效技术,从ClpXP蛋白酶依赖的纳米力学降解到运动蛋白的力依赖的合成能力。尽管有光镊的优点,但这项技术中使用的时间标度与生理情况不一致,这导致了磁镊子的发展,其中蛋白质与玻璃表面共价连接,从而将单个生物分子的观察窗从数分钟增加到数周。与光学镊子不同,磁性镊子利用磁场施加扭矩,这使它们便于研究DNA拓扑和拓扑异构酶的功能。使用修饰的磁镊子,研究人员能够发现分子伴侣的机械作用,该分子伴侣通过在易位过程中拉动其底物蛋白来支持其底物蛋白,并协助其作为机械折叠酶的天然折叠。在本文中,我们重点介绍了单分子技术的许多新作用,从单键断裂到复杂的分子伴侣机制,以及设计机械医学的潜力,

更新日期:2021-05-07
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