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Sandwich-type detection of nucleic acids by bioorthogonal SERS probes.
Nucleosides, Nucleotides & Nucleic Acids ( IF 1.1 ) Pub Date : 2020-12-04 , DOI: 10.1080/15257770.2020.1849718
Ryo Ota 1 , Noriyuki Takagi 1 , Yu Imaizumi 1 , Tomonori Waku 1 , Akio Kobori 1
Affiliation  

Nucleic acids in body fluids, such as circulating cell-free nucleic acids, viral DNA, and RNA have received much attention for their great potential as biomarkers in liquid biopsies of serious diseases. Although quantitative polymerase chain reaction (qPCR) has been traditionally used as a laboratory-based assay for measuring nucleic acids, there is a strong demand for techniques to qualitatively, rapidly, and simply measure the extremely low-abundance nucleic acids in order to realize the nucleic acid-based liquid biopsies. With this aim in mind, we developed a simple and highly sensitive sandwich-type assay for nucleic acids using a combination of surface-enhanced Raman scattering (SERS), which enhances Raman scattering by 108- to 1010-fold, and bioorthogonal Raman tags, which generate signals in the biologically silent region (1800-2800 cm-1). Using gold nanorods having approximately 240 strands of oligonucleotides and 4-cyano-N-(2-mercaptoethyl)benzamide (4CMB) as the bioorthogonal Raman tag, we successfully detected target nucleic acids in a sequence-selective manner.

中文翻译:

通过生物正交SERS探针进行核酸夹心型检测。

体液中的核酸,例如循环中的无细胞核酸,病毒DNA和RNA,作为其在严重疾病的液体活检中的生物标记物的巨大潜力而​​受到广泛关注。尽管传统上将定量聚合酶链反应(qPCR)用作基于实验室的核酸测量方法,但仍强烈需要定性,快速和简单地测量极低丰度核酸的技术,以实现核酸的定量分析。基于核酸的液体活检。为此,我们结合表面增强拉曼散射(SERS)和生物正交拉曼标签,将表面增强拉曼散射(SERS)结合起来,可将拉曼散射提高108到1010倍,从而开发出一种简单且高度灵敏的核酸夹心型检测方法,会在生物学上沉默的区域(1800-2800 cm-1)产生信号。
更新日期:2020-12-04
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