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Genetically encoded multivalent liquid glycan array displayed on M13 bacteriophage
Nature Chemical Biology ( IF 14.8 ) Pub Date : 2021-05-06 , DOI: 10.1038/s41589-021-00788-5
Mirat Sojitra , Susmita Sarkar , Jasmine Maghera , Emily Rodrigues , Eric J. Carpenter , Shaurya Seth , Daniel Ferrer Vinals , Nicholas J. Bennett , Revathi Reddy , Amira Khalil , Xiaochao Xue , Michael R. Bell , Ruixiang Blake Zheng , Ping Zhang , Corwin Nycholat , Justin J. Bailey , Chang-Chun Ling , Todd L. Lowary , James C. Paulson , Matthew S. Macauley , Ratmir Derda

The central dogma of biology does not allow for the study of glycans using DNA sequencing. We report a liquid glycan array (LiGA) platform comprising a library of DNA ‘barcoded’ M13 virions that display 30–1,500 copies of glycans per phage. A LiGA is synthesized by acylation of the phage pVIII protein with a dibenzocyclooctyne, followed by ligation of azido-modified glycans. Pulldown of the LiGA with lectins followed by deep sequencing of the barcodes in the bound phage decodes the optimal structure and density of the recognized glycans. The LiGA is target agnostic and can measure the glycan-binding profile of lectins, such as CD22, on cells in vitro and immune cells in a live mouse. From a mixture of multivalent glycan probes, LiGAs identify the glycoconjugates with optimal avidity necessary for binding to lectins on living cells in vitro and in vivo.



中文翻译:

M13 噬菌体上展示的遗传编码多价液体聚糖阵列

生物学的中心法则不允许使用 DNA 测序来研究聚糖。我们报告了一个液体聚糖阵列 (LiGA) 平台,该平台包含一个 DNA“条形码”M13 病毒粒子库,每个噬菌体显示 30–1,500 个聚糖拷贝。LiGA 是通过用二苯并环辛炔酰化噬菌体 pVIII 蛋白,然后连接叠氮基修饰的聚糖来合成的。用凝集素下拉 LiGA,然后对结合的噬菌体中的条形码进行深度测序,解码已识别聚糖的最佳结构和密度。LiGA 与目标无关,可以测量凝集素(如 CD22)在体外细胞和活小鼠免疫细胞上的聚糖结合概况。从多价聚糖探针的混合物中,

更新日期:2021-05-06
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