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Comparing the Electrophysiology and Morphology of Human and Mouse Layer 2/3 Pyramidal Neurons With Bayesian Networks
Frontiers in Neuroinformatics ( IF 2.5 ) Pub Date : 2021-01-14 , DOI: 10.3389/fninf.2021.580873
Bojan Mihaljević 1 , Pedro Larrañaga 1 , Concha Bielza 1
Affiliation  

Pyramidal neurons are the most common neurons in the cerebral cortex. Understanding how they differ between species is a key challenge in neuroscience. We compared human temporal cortex and mouse visual cortex pyramidal neurons from the Allen Cell Types Database in terms of their electrophysiology and dendritic morphology. We found that, among other differences, human pyramidal neurons had a higher action potential threshold voltage, a lower input resistance, and larger dendritic arbors. We learned Gaussian Bayesian networks from the data in order to identify correlations and conditional independencies between the variables and compare them between the species. We found strong correlations between electrophysiological and morphological variables in both species. In human cells, electrophysiological variables were correlated even with morphological variables that are not directly related to dendritic arbor size or diameter, such as mean bifurcation angle and mean branch tortuosity. Cortical depth was correlated with both electrophysiological and morphological variables in both species, and its effect on electrophysiology could not be explained in terms of the morphological variables. For some variables the effect of cortical depth was opposite in the two species. Overall, the correlations among the variables differed strikingly between human and mouse neurons. Besides identifying correlations and conditional independencies, the learned Bayesian networks might be useful for probabilistic reasoning regarding the morphology and electrophysiology of pyramidal neurons.

中文翻译:

使用贝叶斯网络比较人类和小鼠 2/3 层锥体神经元的电生理学和形态学

锥体神经元是大脑皮层中最常见的神经元。了解它们在物种之间的差异是神经科学的一个关键挑战。我们比较了艾伦细胞类型数据库中的人类颞叶皮层和小鼠视觉皮层锥体神经元的电生理学和树突形态。我们发现,除了其他差异之外,人类锥体神经元具有更高的动作电位阈值电压、更低的输入电阻和更大的树突乔木。我们从数据中学习高斯贝叶斯网络,以便识别变量之间的相关性和条件独立性,并在物种之间进行比较。我们发现这两个物种的电生理学和形态学变量之间存在很强的相关性。在人类细胞中,电生理变量甚至与与树突乔木大小或直径不直接相关的形态变量相关,例如平均分叉角和平均分支弯曲度。两个物种的皮层深度都与电生理学和形态学变量相关,并且其对电生理学的影响无法用形态学变量来解释。对于某些变量,皮质深度的影响在两个物种中是相反的。总体而言,人类和小鼠神经元之间的变量之间的相关性存在显着差异。除了识别相关性和条件独立性之外,学习到的贝叶斯网络可能有助于有关锥体神经元的形态和电生理学的概率推理。
更新日期:2021-03-17
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