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UniverSC: a flexible cross-platform single-cell data processing pipeline
bioRxiv - Bioinformatics Pub Date : 2021-01-19 , DOI: 10.1101/2021.01.19.427209
S. Thomas Kelly , Kai Battenberg , Nicola A. Hetherington , Makoto Hayashi , Aki Minoda

Single-cell RNA-sequencing analysis to quantify RNA molecules in individual cells has become popular owing to the large amount of information one can obtain from each experiment. We have developed UniverSC (https://github.com/minoda-lab/universc), a universal single-cell processing tool that supports any UMI-based platform. Our command-line tool enables consistent and comprehensive integration, comparison, and evaluation across data generated from a wide range of platforms.

中文翻译:

UniverSC:灵活的跨平台单单元数据处理管道

由于可以从每个实验中获得大量信息,因此用于量化单个细胞中RNA分子的单细胞RNA测序分析已变得很流行。我们已经开发了UniverSC(https://github.com/minoda-lab/universc),这是一种通用的单细胞处理工具,支持任何基于UMI的平台。我们的命令行工具可跨多种平台生成的数据进行一致,全面的集成,比较和评估。
更新日期:2021-01-20
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