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A novel age-informed approach for genetic association analysis in Alzheimer's disease
medRxiv - Neurology Pub Date : 2021-01-06 , DOI: 10.1101/2021.01.05.21249292
Yann Le Guen , Michael E. Belloy , Valerio Napolioni , Sarah J. Eger , Gabriel Kennedy , Ran Tao , Zihuai He , Michael D. Greicius ,

Introduction Many Alzheimer's disease (AD) genetic association studies disregard age or incorrectly account for it, hampering variant discovery. Method Using simulated data, we compared the statistical power of several models: logistic regression on AD diagnosis adjusted and not adjusted for age; linear regression on a score integrating case-control status and age; and multivariate Cox regression on age-at-onset. We applied these models to real exome-wide data of 11,127 sequenced individuals (54% cases) and replicated suggestive associations in 21,631 genotype-imputed individuals (51% cases). Results Modelling variable AD risk across age results in 10-20% statistical power gain compared to logistic regression without age adjustment, while incorrect age adjustment leads to critical power loss. Applying our novel AD-age score and/or Cox regression, we discovered and replicated novel variants associated with AD on KIF21B, USH2A, RAB10, RIN3 and TAOK2 genes. Discussion Our AD-age score provides a simple means for statistical power gain and is recommended for future AD studies.

中文翻译:

老年痴呆症遗传关联分析的新方法

简介许多阿尔茨海默氏病(AD)遗传协会研究无视年龄或错误地解释了年龄,从而妨碍了变体的发现。方法使用模拟数据,我们比较了几种模型的统计能力:校正后和未校正年龄的AD诊断的logistic回归;结合病例对照状态和年龄的得分进行线性回归;以及发病年龄的多元Cox回归。我们将这些模型应用于11127个测序个体的实际全基因组数据(54%病例),并在21631个基因型影响个体(51%病例)中复制了暗示性关联。结果与不进行年龄调整的逻辑回归相比,对跨年龄的可变AD风险建模可产生10-20%的统计功效,而错误的年龄调整会导致严重的能量损失。应用我们的新型AD年龄评分和/或Cox回归,我们发现并复制了KIF21B,USH2A,RAB10,RIN3和TAOK2基因上与AD相关的新型变异。讨论我们的AD年龄评分为统计功率增益提供了一种简单的方法,建议将来进行AD研究。
更新日期:2021-01-06
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