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Genome-wide analysis of BES1/BZR1 transcription factors and their responses to osmotic stress in Ammopiptanthus nanus
Journal of Forest Research ( IF 1.3 ) Pub Date : 2020-12-27 , DOI: 10.1080/13416979.2020.1867293
Lei Ding 1 , Xin Guo 1 , Kexin Wang 1 , Haowan Pang 1 , Yuan Liu 1 , Qingqing Yang 1 , Fengling Fu 1 , Wanchen Li 1 , Haoqiang Yu 1
Affiliation  

ABSTRACT

BES1/BZR1s are plant-specific transcription factors and play crucial roles in plant growth, development and response to environmental stress. The Ammopiptanthus nanus (A. nanus) is a relict-xerophyte shrub and tolerates various of abiotic stimuli. However, few genes are identified from A. nanus. To date, the information and function of the AnBES1/BZR1s remains unknown. In the present study, we genome-wide analysed the AnBES1/BZR1s of A. nanus and characterized their properties through sequence analysis and expression profiling against osmotic stress. In total, eight AnBES1/BZR1s were identified from the genome of A. nanus. The most of AnBES1/BZR1s had only one intron. Cis-acting element analysis showed that there were a lot of stress and hormone-responsive elements in the promoter of AnBES1/BZR1s. The phylogenetic tree showed that the AnBES1/BZR1s were clustered into two subfamilies, and shared similar motifs composition and conserved domains in a different subgroup. Two AnBES1/BZR1s (AnBES1/BZR1-1 and -3) were highly expressed in A. nanus. Moreover, the AnBES1/BZR1-3 and -5 were upregulated by PEG and NaCl treatment, respectively. The identification of AnBES1/BZR1s should enable us to further functional study of the AnBES1/BZR1s in A. nanus.

更新日期:2020-12-27
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