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Menoci: lightweight extensible web portal enhancing data management for biomedical research projects
BMC Bioinformatics ( IF 2.9 ) Pub Date : 2020-12-17 , DOI: 10.1186/s12859-020-03928-1
M Suhr 1 , C Lehmann 1 , C R Bauer 1 , T Bender 1 , C Knopp 1 , L Freckmann 1 , B Öst Hansen 1 , C Henke 1 , G Aschenbrandt 1 , L K Kühlborn 1 , S Rheinländer 1 , L Weber 1 , B Marzec 1 , M Hellkamp 2 , P Wieder 2 , U Sax 1 , H Kusch 1, 3 , S Y Nussbeck 1, 4
Affiliation  

Biomedical research projects deal with data management requirements from multiple sources like funding agencies’ guidelines, publisher policies, discipline best practices, and their own users’ needs. We describe functional and quality requirements based on many years of experience implementing data management for the CRC 1002 and CRC 1190. A fully equipped data management software should improve documentation of experiments and materials, enable data storage and sharing according to the FAIR Guiding Principles while maximizing usability, information security, as well as software sustainability and reusability. We introduce the modular web portal software menoci for data collection, experiment documentation, data publication, sharing, and preservation in biomedical research projects. Menoci modules are based on the Drupal content management system which enables lightweight deployment and setup, and creates the possibility to combine research data management with a customisable project home page or collaboration platform. Management of research data and digital research artefacts is transforming from individual researcher or groups best practices towards project- or organisation-wide service infrastructures. To enable and support this structural transformation process, a vital ecosystem of open source software tools is needed. Menoci is a contribution to this ecosystem of research data management tools that is specifically designed to support biomedical research projects.

中文翻译:


Menoci:轻量级可扩展门户网站,增强生物医学研究项目的数据管理



生物医学研究项目处理来自多个来源的数据管理要求,例如资助机构的指南、出版商政策、学科最佳实践以及其自身用户的需求。我们根据多年实施 CRC 1002 和 CRC 1190 数据管理的经验来描述功能和质量要求。装备齐全的数据管理软件应改进实验和材料的记录,根据公平指导原则实现数据存储和共享,同时最大化可用性、信息安全以及软件可持续性和可重用性。我们介绍模块化门户软件 menoci,用于生物医学研究项目中的数据收集、实验文档、数据发布、共享和保存。 Menoci 模块基于 Drupal 内容管理系统,该系统支持轻量级部署和设置,并创造了将研究数据管理与可定制项目主页或协作平台相结合的可能性。研究数据和数字研究制品的管理正在从个人研究人员或团体的最佳实践转变为项目或组织范围的服务基础设施。为了实现和支持这种结构转型过程,需要一个重要的开源软件工具生态系统。 Menoci 是对研究数据管理工具生态系统的贡献,该工具专门用于支持生物医学研究项目。
更新日期:2020-12-17
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