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Complete genome sequence of Janibaecter indicus YB324 from an Atlantic marine sediment
Marine Genomics ( IF 1.3 ) Pub Date : 2020-12-17 , DOI: 10.1016/j.margen.2020.100833
Shengxiang Pei 1 , Fuquan Xie 2 , Rui Zhang 3 , Gaiyun Zhang 2
Affiliation  

Janibacter indicus YB324, a gram-positive, aerobic and non-motile actinobacterium isolated from south Atlantic sediment at a depth of 2875 m. The complete genome sequence of the strain YB324 was obtained using PacBio Sequel HGAP.4 and comprised of 3,369,845 base pairs with a 71.3 mol% G + C content, 3225 protein-coding genes, 53 RNAs. In silico analysis confirmed the genes associated with polysaccharide hydrolyzation, nitrite reduction, and phenol degradation. Multiple natural product biosynthesis gene clusters were identified as well. The complete genome sequence will provide insight into the potential use of this strain in biotechnological and natural product biosynthesis applications.



中文翻译:

来自大西洋海洋沉积物的 Janibaecter indicus YB324 的完整基因组序列

Janibacter indicus YB324,一种革兰氏阳性、需氧和非运动性放线菌,从 2875 m 深度的南大西洋沉积物中分离出来。菌株 YB324 的完整基因组序列是使用 PacBio Sequel HGAP.4 获得的,由 3,369,845 个碱基对组成,G + C 含量为 71.3 mol%,3225 个蛋白质编码基因,53 个 RNA。计算机分析证实了与多糖水解、亚硝酸盐还原和苯酚降解相关的基因。还鉴定了多个天然产物生物合成基因簇。完整的基因组序列将提供对该菌株在生物技术和天然产物生物合成应用中的潜在用途的深入了解。

更新日期:2020-12-17
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