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CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa
Database: The Journal of Biological Databases and Curation ( IF 3.4 ) Pub Date : 2020-12-11 , DOI: 10.1093/database/baaa075
Fabio Gomez-Cano 1 , Lisa Carey 2 , Kevin Lucas 1 , Tatiana García Navarrete 1 , Eric Mukundi 1 , Steve Lundback 1 , Danny Schnell 2 , Erich Grotewold 1
Affiliation  

Camelina is an annual oilseed plant from the Brassicaceae family that is gaining momentum as a biofuel winter cover crop. However, a significant limitation in further enhancing its utility as a producer of oils that can be used as biofuels, jet fuels or bio-based products is the absence of a repository for all the gene expression and regulatory information that is being rapidly generated by the community. Here, we provide CamRegBase (https://camregbase.org/) as a one-stop resource to access Camelina information on gene expression and co-expression, transcription factors, lipid associated genes and genome-wide orthologs in the close-relative reference plant Arabidopsis. We envision this as a resource of curated information for users, as well as a repository of new gene regulation information.

中文翻译:

CamRegBase:生物燃料作物 Camelina sativa 的基因调控数据库

亚麻荠是十字花科一年生油籽植物,作为生物燃料冬季覆盖作物正在获得发展势头。然而,在进一步提高其作为可用作生物燃料、喷气燃料或生物基产品的油的生产商的效用方面的一个重大限制是缺乏所有基因表达和调控信息的存储库,这些信息是由社区。在这里,我们提供 CamRegBase (https://camregbase.org/) 作为一站式资源,以获取 Camelina 有关基因表达和共表达、转录因子、脂质相关基因和全基因组直系同源物的相关信息植物拟南芥。我们将其视为用户精选信息的资源,以及新基因调控信息的存储库。
更新日期:2020-12-11
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