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Tick-borne rickettsiae in Midwestern region of Republic of Korea
Acta Tropica ( IF 2.1 ) Pub Date : 2020-12-10 , DOI: 10.1016/j.actatropica.2020.105794
Hye-Jin Park , Jeoungyeon Kim , Yeon-Joo Choi , Heung-Chul Kim , Terry A Klein , Sung-Tae Chong , Ju Jiang , Allen L. Richards , Won-Jong Jang

To identify spotted fever group (SFG) rickettsiae among ticks collected by dragging at eight sites in three provinces of the midwestern region of the Republic of Korea (ROK), genus- and species-specific quantitative real-time PCR (qPCR) assays and sequencing were performed. DNA was extracted from a total of 2,312 ticks that were assayed individually (n=140) or in pools (n=444), resulting in a total of 584 individual and pooled tick samples. The 584 tick samples were screened with the genus-specific qPCR assay (Rick17b) and produced 265 (45.38%) positive reactions [individual (n=64) and pooled (n=101) samples]. Of these genus-specific positive samples, 57 (21.51%) were identified as Candidatus Rickettsia longicornii and 48 (18.11%) were identified as R. monacensis by species-specific qPCR assays. Subsequently, nested PCR (nPCR) was performed with 120 samples, which tested positive samples for genus-specific, but not species-specific, qPCR assays. The sequences of ompA and ompB genes showed how many close relatedness to Ca. R. longicornii and Ca. R. jingxinensis isolate Xian Hl-79, uncultured Rickettsia sp. Y27-1, Ca. R. tasmanensis strain T152, R. endosymbiont of H. longicornis tick 47, and R. koreansis strain CNH17-7. In conclusion, we successfully detected specific rickettsial agents using qPCR and a sequence-based analysis approach that demonstrated the prevalence of various tick-borne Rickettsia spp. in midwestern ROK.



中文翻译:

大韩民国中部地区的ick传播立克次体

为了鉴定拖拉大韩民国中西部三个地区(ROK)三个省的8个地点采集的tick中的斑点热病立克次体,属和种特异性定量实时PCR(qPCR)分析和测序被执行。从总共2,312个tick中提取DNA,这些individually被单独(n = 140)或合并(n = 444)进行分析,总共产生584个单独的和合并的tick样品。使用属特异性qPCR分析(Rick17b)筛选了584个滴答样本,并产生了265个(45.38%)阳性反应[单个(n = 64),并合并了(n = 101)样本]。这些属特异性阳性样品,57(21.51%)被确定为的暂定立克longicornii和48(18.11%)被确定为R. monacensis通过物种特异性qPCR分析。随后,对120个样品进行了巢式PCR(nPCR),测试了阳性样品的属特异性而非种特异性qPCR分析。ompAompB基因的序列显示出与Ca有多少密切的相关性R. longicornii和Ca. R. jingxinensis分离株西安Hl-79,未培养的立克次体菌。Y27-1,Ca的 塔斯曼河杆菌菌株T152,R . H. longicornis壁虱共生共生壁虱47和韩国R.CNH17-7菌株。总之,我们使用qPCR和基于序列的分析方法成功地检测了特定的立克次体药物,该方法证明了各种tick传立克次体spp的流行。在韩国中西部。

更新日期:2020-12-23
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