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Accessing NCBI data using the NCBI Sequence Viewer and Genome Data Viewer (GDV)
Genome Research ( IF 7 ) Pub Date : 2021-01-01 , DOI: 10.1101/gr.266932.120
Sanjida H Rangwala 1 , Anatoliy Kuznetsov 1 , Victor Ananiev 1 , Andrea Asztalos 1 , Evgeny Borodin 1 , Vladislav Evgeniev 1 , Victor Joukov 1 , Vadim Lotov 1 , Ravinder Pannu 1 , Dmitry Rudnev 1 , Andrew Shkeda 1 , Eric M Weitz 1 , Valerie A Schneider 1
Affiliation  

The National Center for Biotechnology Information (NCBI) is an archive providing free access to a wide range and large volume of biological sequence data and literature. Staff scientists at NCBI analyze user-submitted data in the archive, producing gene and SNP annotation and generating sequence alignment tools. NCBI's flagship genome browser, Genome Data Viewer (GDV), displays our in-house RefSeq annotation; is integrated with other NCBI resources such as Gene, dbGaP, and BLAST; and provides a platform for customized analysis and visualization. Here, we describe how members of the biomedical research community can use GDV and the related NCBI Sequence Viewer (SV) to access, analyze, and disseminate NCBI and custom biomedical sequence data. In addition, we report how users can add SV to their own web pages to create a custom graphical sequence display without the need for infrastructure investments or back-end deployments.

中文翻译:

使用 NCBI 序列查看器和基因组数据查看器 (GDV) 访问 NCBI 数据

国家生物技术信息中心 (NCBI) 是一个档案馆,可免费访问范围广泛且大量的生物序列数据和文献。NCBI 的科学家分析档案中用户提交的数据,生成基因和 SNP 注释并生成序列比对工具。NCBI 的旗舰基因组浏览器 Genome Data Viewer (GDV),显示我们内部的 RefSeq 注释;与其他 NCBI 资源如 Gene、dbGaP 和 BLAST 集成;并提供定制分析和可视化的平台。在这里,我们描述了生物医学研究界的成员如何使用 GDV 和相关的 NCBI 序列查看器 (SV) 来访问、分析和传播 NCBI 和自定义生物医学序列数据。此外,
更新日期:2021-01-04
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