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Structural and dynamics analysis of intrinsically disordered proteins by high-speed atomic force microscopy
Nature Nanotechnology ( IF 38.1 ) Pub Date : 2020-11-23 , DOI: 10.1038/s41565-020-00798-9
Noriyuki Kodera 1 , Daisuke Noshiro 1 , Sujit K Dora 2 , Tetsuya Mori 2 , Johnny Habchi 3 , David Blocquel 3 , Antoine Gruet 3 , Marion Dosnon 3 , Edoardo Salladini 3 , Christophe Bignon 3 , Yuko Fujioka 4 , Takashi Oda 5 , Nobuo N Noda 4 , Mamoru Sato 5 , Marina Lotti 6 , Mineyuki Mizuguchi 7 , Sonia Longhi 3 , Toshio Ando 1
Affiliation  

Intrinsically disordered proteins (IDPs) are ubiquitous proteins that are disordered entirely or partly and play important roles in diverse biological phenomena. Their structure dynamically samples a multitude of conformational states, thus rendering their structural analysis very difficult. Here we explore the potential of high-speed atomic force microscopy (HS-AFM) for characterizing the structure and dynamics of IDPs. Successive HS-AFM images of an IDP molecule can not only identify constantly folded and constantly disordered regions in the molecule, but can also document disorder-to-order transitions. Moreover, the number of amino acids contained in these disordered regions can be roughly estimated, enabling a semiquantitative, realistic description of the dynamic structure of IDPs.



中文翻译:

高速原子力显微镜对本质无序蛋白质的结构和动力学分析

本质上无序的蛋白质 (IDP) 是普遍存在的完全或部分无序的蛋白质,在多种生物现象中发挥重要作用。它们的结构动态地采样了大量的构象状态,因此使得它们的结构分析非常困难。在这里,我们探讨了高速原子力显微镜 (HS-AFM) 在表征 IDP 的结构和动力学方面的潜力。IDP 分子的连续 HS-AFM 图像不仅可以识别分子中不断折叠和不断无序的区域,还可以记录无序到有序的转变。此外,可以粗略估计这些无序区域中包含的氨基酸数量,从而能够对 IDP 的动态结构进行半定量、真实的描述。

更新日期:2020-11-23
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