Abstract

Murraya paniculate, is traditionally used for management of gut, air way and cardiovascular disorders. In this study, we sequenced the complete chloroplast genome of M. paniculata based on next-generation sequencing and used the data to assess genomic resources. The chloroplast genome of M. paniculata is 160,280 bp in length consisting of large and small single-copy regions of length 87,605 and 18,609 bp, separated by two IR regions of 27,033 bp. The overall GC content was 38.61%. De novo assembly and annotation showed the presence of unique genes with 85 protein-coding genes, 29 tRNA genes, and eight rRNA genes. A maximum-likelihood phylogenomic analysis showed that M. paniculata was closely related to M. caloxylon.

摘要

Murraya圆锥状，传统上用于治疗肠道，气道和心血管疾病。在这项研究中，我们基于下一代测序对完整的M. paniculata叶绿体基因组进行了测序，并使用这些数据评估了基因组资源。Paniculata M. paniculata的叶绿体基因组长度为160,280 bp，由大小分别为87,605和18,609 bp的大和小的单拷贝区域组成，被两个27,033 bp的IR区域隔开。总GC含量为38.61％。从头汇编和注释显示存在独特的基因，其中包含85个蛋白质编码基因，29个tRNA基因和8个rRNA基因。最大似然phylogenomic分析显示，M.穿心莲是密切相关的M. caloxylon。