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Confidence Sets for Cohen’s d Effect Size Images
NeuroImage ( IF 4.7 ) Pub Date : 2021-02-01 , DOI: 10.1016/j.neuroimage.2020.117477
Alexander Bowring 1 , Fabian J E Telschow 2 , Armin Schwartzman 3 , Thomas E Nichols 4
Affiliation  

Current statistical inference methods for task-fMRI suffer from two fundamental limitations. First, the focus is solely on detection of non-zero signal or signal change, a problem that is exacerbated for large scale studies (e.g. UK Biobank, N=40,000+) where the 'null hypothesis fallacy' causes even trivial effects to be determined as significant. Second, for any sample size, widely used cluster inference methods only indicate regions where a null hypothesis can be rejected, without providing any notion of spatial uncertainty about the activation. In this work, we address these issues by developing spatial Confidence Sets (CSs) on clusters found in thresholded Cohen's d effect size images. We produce an upper and lower CS to make confidence statements about brain regions where Cohen's d effect sizes have exceeded and fallen short of a non-zero threshold, respectively. The CSs convey information about the magnitude and reliability of effect sizes that is usually given separately in a t-statistic and effect estimate map. We expand the theory developed in our previous work on CSs for %BOLD change effect maps (Bowring et al., 2019) using recent results from the bootstrapping literature. By assessing the empirical coverage with 2D and 3D Monte Carlo simulations resembling fMRI data, we find our method is accurate in sample sizes as low as N=60. We compute Cohen's d CSs for the Human Connectome Project working memory task-fMRI data, illustrating the brain regions with a reliable Cohen's d response for a given threshold. By comparing the CSs with results obtained from a traditional statistical voxelwise inference, we highlight the improvement in activation localization that can be gained with the Confidence Sets.

中文翻译:


Cohen d 效应尺寸图像的置信集



当前任务功能磁共振成像的统计推断方法存在两个基本限制。首先,重点仅在于非零信号或信号变化的检测,对于大规模研究(例如英国生物银行,N=40,000+),这个问题会加剧,其中“零假设谬误”甚至会导致微不足道的影响被确定一样重要。其次,对于任何样本大小,广泛使用的聚类推理方法仅指示可以拒绝原假设的区域,而不提供有关激活的空间不确定性的任何概念。在这项工作中,我们通过在阈值 Cohen's d 效应大小图像中发现的簇上开发空间置信集 (CS) 来解决这些问题。我们生成上部和下部 CS 来对 Cohen d 效应大小分别超过和低于非零阈值的大脑区域做出置信度陈述。 CS 传达有关效应大小的大小和可靠性的信息,这些信息通常在 t 统计量和效应估计图中单独给出。我们使用引导文献的最新结果扩展了我们之前关于 %BOLD 变化效果图的 CS 工作中开发的理论(Bowring 等人,2019)。通过评估类似于功能磁共振成像数据的 2D 和 3D 蒙特卡罗模拟的经验覆盖率,我们发现我们的方法在样本量低至 N=60 时是准确的。我们计算人类连接组计划工作记忆任务 fMRI 数据的科恩 d CS,说明对于给定阈值具有可靠科恩 d 响应的大脑区域。通过将 CS 与传统统计体素推理获得的结果进行比较,我们强调了通过置信集可以获得的激活定位的改进。
更新日期:2021-02-01
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