Definition of a SNP panel for paternity testing in ten sheep populations in Mexico,Small Ruminant Research

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Definition of a SNP panel for paternity testing in ten sheep populations in Mexico
Small Ruminant Research ( IF 1.6 ) Pub Date : 2020-12-01 , DOI: 10.1016/j.smallrumres.2020.106262
Joel Domínguez-Viveros , Felipe Alonso Rodríguez-Almeida , Francisco Joel Jahuey-Martínez , José Alfredo Martínez-Quintana , Guadalupe Nelson Aguilar-Palma , Perla Ordoñez-Baquera

Abstract This study aimed to edit the SNPs panel for sheep paternity testing in Mexico. The genotypes of 10,097 individuals distributed in ten breeds were analyzed: Blackbelly (459), Charollais (209), White Dorper (122), Dorper (2106), Dorset (534), Hampshire (1,298), Katahdin (3864), Pelibuey (821), Suffolk (596), and Texel (88). In all breeds the panel was comprised of 84 SNPs; the allele frequencies, the polymorphic information content (PIC), and the Hardy-Weinberg (HW) equilibrium were evaluated. Within breeds, the SNPs with HW disequilibrium (p

中文翻译：

用于在墨西哥十个绵羊种群中进行亲子鉴定的 SNP 面板的定义

摘要本研究旨在编辑用于墨西哥绵羊亲子鉴定的 SNP 面板。分析了分布在 10 个品种中的 10,097 个个体的基因型：Blackbelly (459)、Charollais (209)、White Dorper (122)、Dorper (2106)、Dorset (534)、Hampshire (1,298)、Katahdin (3864)、Pelibuey ( 821)、萨福克 (596) 和特塞尔 (88)。在所有品种中，该小组由 84 个 SNP 组成；评估了等位基因频率、多态信息含量 (PIC) 和 Hardy-Weinberg (HW) 平衡。在品种内，具有 HW 不平衡的 SNP (p

更新日期：2020-12-01

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