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Multimodal mapping of the tumor and peripheral blood immune landscape in human pancreatic cancer
Nature Cancer ( IF 23.5 ) Pub Date : 2020-10-26 , DOI: 10.1038/s43018-020-00121-4
Nina G Steele 1 , Eileen S Carpenter 2 , Samantha B Kemp 3 , Veerin R Sirihorachai 4 , Stephanie The 5 , Lawrence Delrosario 6 , Jenny Lazarus 6 , El-Ad David Amir 7 , Valerie Gunchick 8 , Carlos Espinoza 6 , Samantha Bell 6 , Lindsey Harris 9 , Fatima Lima 6 , Valerie Irizarry-Negron 6 , Daniel Paglia 9 , Justin Macchia 6 , Angel Ka Yan Chu 5 , Heather Schofield 6 , Erik-Jan Wamsteker 2 , Richard Kwon 2 , Allison Schulman 2 , Anoop Prabhu 2 , Ryan Law 2 , Arjun Sondhi 2 , Jessica Yu 2 , Arpan Patel 2 , Katelyn Donahue 4 , Hari Nathan 6 , Clifford Cho 6 , Michelle A Anderson 2 , Vaibhav Sahai 8 , Costas A Lyssiotis 3, 4, 9 , Weiping Zou 6 , Benjamin L Allen 1 , Arvind Rao 4, 5, 10, 11 , Howard C Crawford 3, 4, 9 , Filip Bednar 6 , Timothy L Frankel 6 , Marina Pasca di Magliano 1, 3, 4, 6
Affiliation  

Pancreatic ductal adenocarcinoma (PDA) is characterized by an immune-suppressive tumor microenvironment that renders it largely refractory to immunotherapy. We implemented a multimodal analysis approach to elucidate the immune landscape in PDA. Using a combination of CyTOF, single-cell RNA sequencing and multiplex immunohistochemistry on patient tumors, matched blood and non-malignant samples, we uncovered a complex network of immune-suppressive cellular interactions. These experiments revealed heterogeneous expression of immune checkpoint receptors in individual patients’ T cells and increased markers of CD8+ T cell dysfunction in the advanced disease stage. Tumor-infiltrating CD8+ T cells had an increased proportion of cells expressing an exhausted expression profile that included upregulation of the immune checkpoint TIGIT, a finding that we validated at the protein level. Our findings point to a profound alteration of the immune landscape of tumors, and to patient-specific immune changes that should be taken into account as combination immunotherapy becomes available for pancreatic cancer.



中文翻译:


人类胰腺癌肿瘤和外周血免疫景观的多模式图谱



胰腺导管腺癌(PDA)的特点是免疫抑制性肿瘤微环境,使其在很大程度上难以接受免疫治疗。我们采用多模式分析方法来阐明 PDA 中的免疫景观。通过结合 CyTOF、单细胞 RNA 测序和多重免疫组织化学对患者肿瘤、匹配的血液和非恶性样本进行分析,我们发现了免疫抑制细胞相互作用的复杂网络。这些实验揭示了个体患者 T 细胞中免疫检查点受体的异质表达,以及晚期疾病阶段 CD8 + T 细胞功能障碍的标志物增加。肿瘤浸润 CD8 + T 细胞中表达耗尽表达谱的细胞比例增加,其中包括免疫检查点TIGIT的上调,我们在蛋白质水平上验证了这一发现。我们的研究结果表明肿瘤的免疫格局发生了深刻的改变,并且随着联合免疫疗法可用于胰腺癌,应考虑患者特异性的免疫变化。

更新日期:2020-10-28
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