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Epstein-Barr virus promotes survival through germinal center light zone chromatin architecture
bioRxiv - Immunology Pub Date : 2020-10-22 , DOI: 10.1101/2020.10.22.350108
Joanne Dai , Emma Heckenberg , Lingyun Song , Gregory E. Crawford , Micah A. Luftig

BFL-1 is an understudied anti-apoptotic protein upregulated in cancer and Epstein-Barr virus (EBV)-immortalized lymphoblastoid cell lines (LCLs). We have previously shown that BFL23 1 is regulated through viral EBNA3A-mediated alterations in B-cell chromatin conformation (Price et al., 2017). Here, we extend those findings to define cis- and trans-acting factors that regulate BFL-1 in LCLs and reliance on BFL-1 for survival from extrinsic apoptosis. Beyond LCLs, BFL-1 is expressed in B cells maturing in the germinal center (GC). We therefore characterized the gene expression profiles and chromatin landscape of maturing human tonsillar B-cell subsets. While chromatin accessibility at the BFL-1 locus increases as naïve B cells enter the GC reaction, BFL29 1 expression increases during the transition from dark zone to light zone (LZ) correlating with association between enhancer regions and the transcriptional start site. The relationship between LCLs and LZ B cells suggests that EBV phenocopies GC biology to enhance their survival in establishing latent infection.

中文翻译:

爱泼斯坦-巴尔病毒通过生发中心光区染色质结构促进存活

BFL-1是一种在癌症和Epstein-Barr病毒(EBV)永生化的淋巴母细胞样细胞系(LCL)中上调的,尚未充分研究的抗凋亡蛋白。我们之前已经证明BFL23 1是通过病毒EBNA3A介导的B细胞染色质构象变化来调节的(Price等,2017)。在这里,我们扩展了这些发现,以定义在LCL中调节BFL-1的顺式和反式作用因子,并依赖BFL-1来从外源性凋亡中存活。除了LCL外,BFL-1在发芽中心(GC)中成熟的B细胞中表达。因此,我们表征了成熟的扁桃体B细胞亚群的基因表达谱和染色质分布。随着幼稚B细胞进入GC反应,BFL-1位点的染色质可及性增加,BFL29 1表达在从暗区到亮区(LZ)的过渡过程中增加,与增强子区域和转录起始位点之间的关联相关。LCL和LZ B细胞之间的关系表明EBV表型复制GC生物学以增强其在建立潜在感染中的存活率。
更新日期:2020-10-27
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