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Purification and characterization of a cold-adapted κ-carrageenase from Pseudoalteromonas sp. ZDY3
Protein Expression and Purification ( IF 1.6 ) Pub Date : 2020-10-06 , DOI: 10.1016/j.pep.2020.105768
Dongying Zhao 1 , Bo Jiang 1 , Yue Zhang 1 , Wenhui Sun 1 , Zhongji Pu 1 , Yongming Bao 2
Affiliation  

κ-Carrageenase (EC3.2.1.83) is a class of glycoside hydrolase, which can be used for hydrolysis of κ-carrageenan to κ-carrageenan oligosaccharides. In this study, a bacterium, identified as Pseudoalteromonas sp. ZDY3 isolated from rotten algae, was capable to degrade κ-carrageenan. The κ-carrageenase produced by Pseudoalteromonas sp. ZDY3 was purified to homogeneity and named as CgkZDY3. The accurate molecular mass of CgkZDY3 was determined through LC-HRMS, and a posttranslational removal of C-terminal end of the protein was discovered. CgkZDY3 had strict hydrolysis specificity to κ-carrageenan, the values of Km and kcat/Km of CgkZDY3 were 3.67 mg mL−1 and 53.0 mL mg−1 s−1, respectively. CgkZDY3 was a cold-adapted κ-carrageenase with excellent storage stability of both the temperature below 35 °C and a wide pH range, and was an endo-type κ-carrageenase with high hydrolysis rate, oligosaccharides with different degrees of polymerization can be obtained by controlling the hydrolysis time, and the final products were κ-neocarrabiose and κ-neocarratetraose. These properties are of great significance for production of κ-carrageenan oligosaccharides with different polymerization degrees under process control.



中文翻译:

拟南芥假单胞菌一种冷适应的κ-角叉菜胶的纯化和鉴定。ZDY3

κ-角叉菜胶酶(EC3.2.1.83)是一类糖苷水解酶,可用于将κ-角叉菜胶水解为κ-角叉菜胶寡糖。在这项研究中,一种细菌被鉴定为假单胞菌属。从腐烂的藻类中分离出的ZDY3能够降解κ角叉菜胶。假单胞菌属sp产生的κ-角叉菜胶。将ZDY3纯化至均质,并将其命名为CgkZDY3。通过LC-HRMS确定CgkZDY3的准确分子量,并发现翻译后去除了蛋白质的C末端。CgkZDY3对κ-角叉菜胶具有严格的水解特异性,K mk cat / K m的值CgkZDY3的Mg分别为3.67mg mL -1和53.0mL mg -1  s -1。CgkZDY3是一种低温适应的κ-角叉菜胶酶,在低于35°C的温度和宽pH范围内均具有优异的储存稳定性,并且是一种内切型κ-角叉菜胶酶,具有较高的水解速率,可以得到不同聚合度的寡糖。通过控制水解时间,最终产物为κ-新芥酸和κ-新四糖。这些性质对于在工艺控制下生产不同聚合度的κ-角叉菜胶低聚糖具有重要意义。

更新日期:2020-10-08
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