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Continental‐scale metagenomics, BLAST searches, and herbarium specimens: The Australian Microbiome Initiative and the National Herbarium of Victoria
Applications in Plant Sciences ( IF 2.7 ) Pub Date : 2020-09-30 , DOI: 10.1002/aps3.11392
Naveed Davoodian 1 , Christopher J Jackson 1 , Gareth D Holmes 1 , Teresa Lebel 1
Affiliation  

Motivated to make sensible interpretations of the massive volume of data from the Australian Microbiome Initiative (AusMic), we characterize the soil mycota of Australia. We establish operational taxonomic units (OTUs) from the data and compare these to GenBank and a data set from the National Herbarium of Victoria (MEL), Melbourne, Australia. We also provide visualizations of Agaricomycete diversity, drawn from our analyses of the AusMic sequences and taxonomy.

中文翻译:


大陆规模的宏基因组学、BLAST 搜索和植物标本馆标本:澳大利亚微生物组计划和维多利亚国家植物标本馆



为了对澳大利亚微生物组计划 (AusMic) 的大量数据做出合理的解释,我们描述了澳大利亚土壤真菌的特征。我们根据数据建立了操作分类单位 (OTU),并将其与 GenBank 和澳大利亚墨尔本维多利亚国家植物标本馆 (MEL) 的数据集进行比较。我们还根据对 AusMic 序列和分类学的分析提供了伞形孢菌多样性的可视化。
更新日期:2020-09-30
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