Mitochondrial DNA Part B ( IF 0.5 ) Pub Date : 2020-09-29 , DOI: 10.1080/23802359.2020.1823264 Ziyang Yue 1 , Huixia Kao 1 , Yu Zhang 2 , Tiemei Wang 3 , Shubin Dong 1 , Jin Cheng 4
Abstract
Coelogyne fimbriata is an important orchid species with high medicinal value. Its complete chloroplast genome is 158,935 bp in length, which possesses the typical structure consising of a small single-copy region (SSC) of 18,743 bp, two inverted repeats (IRs) of 26,374 bp, and a large-single copy region (LSC) of 87,444 bp. The genome encodes 137 genes, including 91 protein-coding genes (PCGs), 38 tRNA genes and 8 rRNA genes. And the overall GC content is 37.40%. In addition, our phylogenetic analysis based on cp genome revealed the phylogenetic relationship between C. fimbriata and other 22 species in Orchidaceae.
中文翻译:
药用兰花物种Coelogyne fimbriata(兰科)的完整叶绿体基因组序列
摘要
Coelogyne fimbriata是重要的兰花品种,具有很高的药用价值。其完整的叶绿体基因组长度为158,935 bp,具有典型的结构,包括一个18,743 bp的小单拷贝区(SSC),两个26,374 bp的反向反向重复(IR)和一个大单拷贝区(LSC) 87444 bp。该基因组编码137个基因,包括91个蛋白质编码基因(PCG),38个tRNA基因和8个rRNA基因。GC的总含量为37.40%。此外,我们基于cp基因组的系统发育分析揭示了C. fimbriata与兰科的其他22种之间的系统发育关系。