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Genetic and Epigenetic Factors of E3/E3 Genotypes of APO-E Gene as a Strong Predictor for the Diagnosis of Coronary Artery Disease Patients of South India
Current Proteomics ( IF 0.5 ) Pub Date : 2020-03-31 , DOI: 10.2174/1570164616666190724095158
Javeed Ahmad Tantray 1 , Karnati Pratap Reddy 1 , Kaiser Jamil 2 , Waseem Gul Lone 3 , Shiva Kumar Yerra 4
Affiliation  

Background: The role of Apolipoprotein-E (APO-E) in lipid metabolism and cholesterol transport is a key component of lipid metabolism which plays a role in diseases like hypercholesterolemia, diabetes, and cardiovascular disease. The aim of this study was to determine the genotypes, allelic frequencies, gene expression and methylation related to apolipoprotein E polymorphism in Coronary Artery Disease (CAD) patients and compare with non-CAD healthy subjects of South Indian population.

Methods: The APO-E alleles and genotypes were determined by PCR-RFLP. Gene expression profiles for E3/E3 genotypes were determined using RT-PCR and methylation status was determined using Methyl Specific PCR assay in one hundred patients and an equal number of controls.

Results: Four APO-E genotypes (E4/E4, E3/E3, E3/E4, and E2/E3) were identified with different allele frequency. Among these, E3/E3 genotype and E3 allele were found to be significantly higher in cases than controls. The present study showed that the mRNA expression of APO-E was up-regulated in CAD patients with E3/E3 genotype in comparison with controls. Methylation status indicated a significant association of E3/E3 genotypes with the disease.

Conclusion: Different populations studied worldwide showed inherent variable frequencies of the APO-E alleles and genotypes, with the most frequent allele being E3. In this study, the APO-E genotypes E2/E3/E4 showed variable response to CAD, further, there was a significant association of E3/E3 genotypes to CAD risk; this genotype can be suggested for the diagnosis of CAD.



中文翻译:

APO-E基因E3 / E3基因型的遗传和表观遗传因素是印度南部冠状动脉疾病患者诊断的有力预测指标

背景:载脂蛋白E (APO-E)在脂质代谢和胆固醇转运中的作用是脂质代谢的关键组成部分,在诸如高胆固醇血症,糖尿病和心血管疾病等疾病中发挥作用。这项研究的目的是确定与冠状动脉疾病(CAD)患者中载脂蛋白E多态性相关的基因型,等位基因频率,基因表达和甲基化,并与南印度人群的非CAD健康受试者进行比较。

方法:采用PCR-RFLP技术检测APO-E等位基因和基因型。使用RT-PCR确定E3 / E3基因型的基因表达谱,并使用甲基特异性PCR测定法在100名患者和相同数量的对照中确定甲基化状态。

结果:鉴定出四种具有等位基因频率的APO-E基因型(E4 / E4,E3 / E3,E3 / E4E2 / E3)。其中,发现E3 / E3基因型和E3等位基因在病例中显着高于对照。本研究表明,与对照组相比,E3 / E3基因型的CAD患者中APO-E的mRNA表达上调。甲基化状态表明E3 / E3基因型与该疾病显着相关。

结论:全世界研究的不同人群显示出APO-E等位基因和基因型固有的可变频率,最常见的等位基因是E3。在这项研究中,APO-E基因型E2 / E3 / E4对CAD表现出不同的反应,此外,E3 / E3基因型与CAD风险显着相关。该基因型可建议用于CAD诊断。

更新日期:2020-03-31
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