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MicrobiomeExplorer: an R package for the analysis and visualization of microbial communities
Bioinformatics ( IF 4.4 ) Pub Date : 2020-10-30 , DOI: 10.1093/bioinformatics/btaa838
Janina Reeder 1 , Mo Huang 2, 3 , Joshua S Kaminker 1 , Joseph N Paulson 3
Affiliation  

We developed the MicrobiomeExplorer R package to facilitate the analysis and visualization of microbial communities. The MicrobiomeExplorer R package allows a user to perform typical microbiome analytic workflows and visualize their results, either through the command line or an interactive Shiny application included with the package. In addition to applying common analytical workflows, the application enables automated analysis report generation.

中文翻译:

MicrobiomeExplorer:用于微生物群落分析和可视化的 R 包

我们开发了MicrobiomeExplorer R 包来促进微生物群落的分析和可视化。所述MicrobiomeExplorer ř包允许用户通过命令行或包含在封装中的交互式应用程序闪亮执行典型的微生物分析的工作流程和可视化它们的结果。除了应用常见的分析工作流程外,该应用程序还支持自动生成分析报告。
更新日期:2020-10-30
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