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Limnobacter alexandrii sp. nov., a thiosulfate-oxidizing, heterotrophic and EPS-bearing Burkholderiaceae isolated from cultivable phycosphere microbiota of toxic Alexandrium catenella LZT09.
Antonie van Leeuwenhoek ( IF 1.8 ) Pub Date : 2020-09-21 , DOI: 10.1007/s10482-020-01473-8
Yuhan Duan 1 , Zhiwei Jiang 1, 2 , Zheng Wu 1 , Zhi Sheng 3 , Xi Yang 2 , Jingya Sun 1 , Xiaoling Zhang 1 , Qiao Yang 1 , Xinwei Yu 4 , Jianbo Yan 4
Affiliation  

A novel Gram-negative, aerobic, motile and short rod-shaped bacterium with exopolysaccharides production, designated as LZ-4T, was isolated from cultivable phycosphere microbiota of harmful algal blooms-causing marine dinoflagellate Alexandrium catenella LZT09 which produces paralytic shellfish poisoning toxins. Strain LZ-4T was able to use thiosulfate (optimum concentration 10 mM) as energy source for bacterial growth. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain LZ-4T belonged to the genus Limnobacter, showing high 16S rRNA gene sequences similarities with L. thiooxidans DSM 13612T (99.4%), L. humi NBRC 11650T (98.2%) and L. litoralis NBRC 105857T (97.2%), respectively. The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between LZ-4T and L. thiooxidans DSM 13612T were 78.9 and 21.9%, respectively. Both values were far lower than the thresholds (95–96% for ANI and 70% for dDDH) generally accepted for new species delineation. The respiratory quinone of strain LZ-4T was Q-8. The dominant cellular fatty acids were determined as summed feature 3 (C16:1 ω6c/ω7c), summed feature 8 (C18:1 ω6c/ω7c) and C16:0. Polar lipids profile consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, two unidentified aminolipids and three unidentified polar lipids. The genomic DNA G+C content of strain LZ-4T was 52.5 mol%. Based on polyphasic characterization, strain LZ-4T represents a novel species of the genus Limnobacter, for which the name Limnobacter alexandrii sp. nov. is proposed. The type strain is LZ-4T (=CCTCC AB 2019004T =KCTC 72281T).



中文翻译:

亚历山大杆菌(Limnobacter alexandrii sp。)nov。,从有毒亚历山大藻LZT09的可培养菌圈微生物区系中分离出来的一种硫代硫酸盐氧化,异养和带EPS的伯克霍尔德杆菌科。

从有害藻华的可培养菌圈菌群中分离出一种新型的革兰氏阴性,好氧,能动和短杆状产外多糖的细菌,命名为LZ-4 T,该菌群可引起海洋藻类鞭毛藻亚历山大藻(Alexandre catenella) LZT09,产生麻痹性贝类中毒毒素。LZ-4 T菌株能够使用硫代硫酸盐(最佳浓度为10 mM)作为细菌生长的能源。基于16S rRNA基因序列的系统发育分析表明,菌株LZ-4 T属于Limnobacter属,与硫氧化乳杆菌DSM 13612 T(99.4%)具有很高的16S rRNA基因序列相似性NBRC 11650 T(98.2%)和利落NBRC 105857 T(97.2%)。平均核苷酸同一性(ANI)和数字DNA-DNA杂交(DDDH)值LZ-4之间ŤL.杆菌DSM 13612 Ť分别为78.9和21.9%之间。这两个值均远低于新物种划分所公认的阈值(ANI的95-96%和dDDH的70%)。LZ-4 T菌株的呼吸醌为Q-8。占主导地位的细胞脂肪酸确定为相加特征3(C 16:1 ω 6C / ω 7C),总结特征8(C 18:1 ω 6C / ω7c)和C 16:0。极性脂质谱由二磷脂酰甘油,磷脂酰乙醇胺,磷脂酰甘油,两种未鉴定的氨基脂质和三种未鉴定的极性脂质组成。应变LZ-4的基因组DNA G + C含量Ť率为52.5摩尔%。基于多相表征,菌株LZ-4 T代表了Limnobacter属的一个新种,其名称为Limnobacter alexandrii sp。十一月 被提议。类型菌株为LZ-4 T(= CCTCC AB 2019004 T = KCTC 72281 T)。

更新日期:2020-09-21
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