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Advanced eMAGE for highly efficient combinatorial editing of a stable genome
bioRxiv - Synthetic Biology Pub Date : 2020-08-31 , DOI: 10.1101/2020.08.30.256743
Zhuobin Liang , Eli Metzner , Farren J. Isaacs

Eukaryotic multiplex genome engineering (eMAGE) offers a powerful tool to generate precise combinatorial genome modifications in Saccharomyces cerevisiae. We optimize the design of synthetic oligonucleotides and enrichment of edited populations to increase editing frequencies up to 90%, reduce workflow time by 40%, and engineer a tunable mismatch repair system to lower the rate of spontaneous mutations ~17-fold. These advances transiently evade genome maintenance to introduce multiple edits at high efficiencies in a stable genetic background, expanding utility of eMAGE in eukaryotic cells.

中文翻译:

先进的eMAGE用于稳定基因组的高效组合编辑

真核多重基因组工程(eMAGE)提供了一个强大的工具,可以在酿酒酵母中产生精确的组合基因组修饰。我们优化了合成寡核苷酸的设计,优化了编辑后的种群,使编辑频率提高了90%,工作流程时间减少了40%,并设计了可调节的错配修复系统,将自发突变率降低了17倍。这些进展短暂地逃避了基因组维护,在稳定的遗传背景下高效导入了多个编辑,扩大了eMAGE在真核细胞中的效用。
更新日期:2020-09-01
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