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Evolutionary State-Space Model and Its Application to Time-Frequency Analysis of Local Field Potentials
Statistica Sinica ( IF 1.5 ) Pub Date : 2020-01-01 , DOI: 10.5705/ss.202017.0420
Xu Gao 1 , Weining Shen 1 , Babak Shahbaba 1 , Norbert J Fortin 2 , Hernando Ombao 3
Affiliation  

We propose an evolutionary state space model (E-SSM) for analyzing high dimensional brain signals whose statistical properties evolve over the course of a non-spatial memory experiment. Under E-SSM, brain signals are modeled as mixtures of components (e.g., AR(2) process) with oscillatory activity at pre-defined frequency bands. To account for the potential non-stationarity of these components (since the brain responses could vary throughout the entire experiment), the parameters are allowed to vary over epochs. Compared with classical approaches such as independent component analysis and filtering, the proposed method accounts for the entire temporal correlation of the components and accommodates non-stationarity. For inference purpose, we propose a novel computational algorithm based upon using Kalman smoother, maximum likelihood and blocked resampling. The E-SSM model is applied to simulation studies and an application to a multi-epoch local field potentials (LFP) signal data collected from a non-spatial (olfactory) sequence memory task study. The results confirm that our method captures the evolution of the power for different components across different phases in the experiment and identifies clusters of electrodes that behave similarly with respect to the decomposition of different sources. These findings suggest that the activity of different electrodes does change over the course of an experiment in practice; treating these epoch recordings as realizations of an identical process could lead to misleading results. In summary, the proposed method underscores the importance of capturing the evolution in brain responses over the study period.

中文翻译:


演化状态空间模型及其在局部场势时频分析中的应用



我们提出了一种进化状态空间模型(E-SSM),用于分析高维大脑信号,其统计特性在非空间记忆实验过程中不断演变。在E-SSM下,大脑信号被建模为在预定义频带内具有振荡活动的成分的混合物(例如,AR(2)过程)。为了解释这些组件潜在的非平稳性(因为大脑反应在整个实验过程中可能会有所不同),允许参数在不同的时期内变化。与独立分量分析和滤波等经典方法相比,所提出的方法考虑了分量的整个时间相关性并适应非平稳性。出于推理目的,我们提出了一种基于卡尔曼平滑器、最大似然和分块重采样的新型计算算法。 E-SSM 模型应用于模拟研究以及从非空间(嗅觉)序列记忆任务研究收集的多时期局部场电位(LFP)信号数据的应用。结果证实,我们的方法捕获了实验中不同阶段不同组件的功率演变,并识别了在不同来源的分解方面表现相似的电极簇。这些发现表明,不同电极的活性在实践中的实验过程中确实会发生变化。将这些纪元记录视为同一过程的实现可能会导致误导性结果。总之,所提出的方法强调了在研究期间捕获大脑反应演变的重要性。
更新日期:2020-01-01
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