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Recent advances of automated methods for searching and extracting genomic variant information from biomedical literature.
Briefings in Bioinformatics ( IF 6.8 ) Pub Date : 2020-08-07 , DOI: 10.1093/bib/bbaa142
Kyubum Lee 1 , Chih-Hsuan Wei 1 , Zhiyong Lu 1
Affiliation  

To obtain key information for personalized medicine and cancer research, clinicians and researchers in the biomedical field are in great need of searching genomic variant information from the biomedical literature now than ever before. Due to the various written forms of genomic variants, however, it is difficult to locate the right information from the literature when using a general literature search system. To address the difficulty of locating genomic variant information from the literature, researchers have suggested various solutions based on automated literature-mining techniques. There is, however, no study for summarizing and comparing existing tools for genomic variant literature mining in terms of how to search easily for information in the literature on genomic variants.

中文翻译:

从生物医学文献中搜索和提取基因组变异信息的自动化方法的最新进展。

为了获得个性化医疗和癌症研究的关键信息,生物医学领域的临床医生和研究人员比以往任何时候都更需要从生物医学文献中搜索基因组变异信息。然而,由于基因组变异的书面形式多种多样,使用通用文献检索系统很难从文献中找到正确的信息。为了解决从文献中定位基因组变异信息的困难,研究人员提出了基于自动文献挖掘技术的各种解决方案。然而,目前还没有研究总结和比较现有的基因组变异文献挖掘工具,如何轻松地搜索基因组变异文献中的信息。
更新日期:2020-08-11
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