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The complete chloroplast genome of Ulmus parvifolia, an important landscaping tree
Mitochondrial DNA Part B ( IF 0.610 ) Pub Date : 2020-07-30 , DOI: 10.1080/23802359.2020.1797586
Yunzhou Lyu 1 , Min Zhai 2, 3 , Zeping Jiang 1 , Qingsheng Chen 1
Affiliation  

Abstract

Ulmus parvifolia is a promising tree species for landscaping. In this study, the complete genome of U. parvifolia was reported using next-generation sequencing technology. The chloroplast genome was a circular double-stranded DNA molecule with 159,182 bp in length. It contained a large single copy (LSC) region of 87,838 bp, a small single copy (SSC) region of 18,750 bp, and two inverted repeat (IRa and IRb) regions of 26,297 bp each, which exhibited a typical quadripartite structure. A total of 133 genes were identified, including 84 protein-coding genes, 41 tRNA genes, and eight rRNA genes. The overall GC content in the chloroplast genome was 35.59%. Phylogenetic analysis indicated that U. parvifolia, as a representative of Sect. Microptelea within the Ulmus genus, is sister to the species of Sect. Ulmus.



中文翻译:

重要景观树榆树的完整叶绿体基因组

摘要

榆树是美化前景的树种。在这项研究中,报告了使用下一代测序技术的小果蝇的完整基因组。叶绿体基因组是环状双链DNA分子,长度为159,182 bp。它包含一个87,838 bp的大单拷贝(LSC)区域,一个18,750 bp的小单拷贝(SSC)区域,以及每个分别为26,297 bp的两个反向重复序列(IRa和IRb)区域,表现出典型的四方结构。共鉴定出133个基因,包括84个蛋白质编码基因,41个tRNA基因和8个rRNA基因。叶绿体基因组中的总GC含量为35.59%。系统发育分析表明,U. parvifolia,作为一个代表。小翼虫属中,是该种的姐妹。乌尔姆斯

更新日期:2020-07-30
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