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Aminoacylation of short hairpin RNAs through kissing-loop interactions indicates evolutionary trend of RNA molecules.
Biosystems ( IF 2.0 ) Pub Date : 2020-07-05 , DOI: 10.1016/j.biosystems.2020.104206
Hiromi Mutsuro-Aoki 1 , Kokoro Hamachi 1 , Ryodai Kurihara 1 , Koji Tamura 2
Affiliation  

The unique G3:U70 base pair in the acceptor stem of tRNAAla has been shown to be a critical recognition site by alanyl-tRNA synthetase (AlaRS). The base pair resides on one of the arms of the L-shaped structure of tRNA (minihelix) and the genetic code has likely evolved from a primordial tRNA-aaRS (aminoacyl-tRNA synthetase) system. In terms of the evolution of tRNA, incorporation of a G:U base pair in the structure would be important. Here, we found that two independent short hairpin RNAs change their conformation through kissing-loop interactions, finally forming a minihelix-like structure, in which the G3:U70 base pair is incorporated. The RNA system can be properly aminoacylated by the minimal Escherichia coli AlaRS variant with alanylation activity (AlaRS442N). Thus, characteristic structural features produced via kissing-loop interactions may provide important clues into the evolution of RNA.



中文翻译:

短发夹 RNA 通过亲吻环相互作用的氨基酰化表明 RNA 分子的进化趋势。

tRNA Ala受体茎中独特的 G3:U70 碱基对已被证明是丙氨酰 tRNA 合成酶 (AlaRS) 的关键识别位点。碱基对位于 tRNA(小螺旋)的 L 形结构的一个臂上,遗传密码很可能是从原始 tRNA-aaRS(氨酰基-tRNA 合成酶)系统进化而来的。就 tRNA 的进化而言,在结构中加入 G:U 碱基对很重要。在这里,我们发现两个独立的短发夹 RNA 通过亲吻环相互作用改变了它们的构象,最终形成了一个类似小螺旋的结构,其中包含了 G3:U70 碱基对。RNA系统可以被最小的大肠杆菌适当地氨酰化具有丙氨酸化活性的 AlaRS 变体 (AlaRS442N)。因此,通过亲吻环相互作用产生的特征结构特征可能为 RNA 的进化提供重要线索。

更新日期:2020-07-05
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