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Fluctuating expression of miR-584 in primary and high-grade gastric cancer.
BMC Cancer ( IF 3.4 ) Pub Date : 2020-07-02 , DOI: 10.1186/s12885-020-07116-5
Laleh Ebrahimi Ghahnavieh 1 , Hossein Tabatabaeian 2, 3 , Zhaleh Ebrahimi Ghahnavieh 4 , Mohammad Amin Honardoost 2 , Mansoureh Azadeh 5 , Mohamad Moazeni Bistgani 6 , Kamran Ghaedi 2, 7
Affiliation  

Gastric cancer is the fifth most common cancer worldwide. Along with environmental factors, such as Helicobacter pylori (H. pylori) infection, genetic changes play important roles in gastric tumor formations. miR-584 is a less well-characterized microRNA (miRNA), with apparent activity in human cancers. However, miR-584 expression pattern in gastric cancer development has remained unclear. This study aims to analyze the expression of miR-584 in gastric cancer samples and investigates the associations between this miRNA and H. pylori infection and clinical characteristics. The expression level of miR-584 was studied in primary gastric cancers versus healthy control gastric mucosa samples using the RT-qPCR method. The clinical data were analyzed statistically in terms of miR-584 expression. In silico studies were employed to study miR-584 more broadly in order to assess its expression and find new potential target genes. Both experimental and in silico studies showed up-regulation of miR-584 in patients with gastric cancer. This up-regulation seems to be induced by H. pylori infection since the infected samples showed increased levels of miR-584 expression. Deeper analyses revealed that miR-584 undergoes a dramatic down-regulation in late stages, invasive and lymph node-metastatic gastric tumors. Bioinformatics studies demonstrated that miR-584 has a substantial role in cancer pathways and has the potential to target STAT1 transcripts. Consistent with the inverse correlation between TCGA RNA-seq data of miR-584 and STAT1 transcripts, the qPCR analysis showed a significant negative correlation between these two RNAs in a set of clinical samples. miR-584 undergoes up-regulation in the stage of primary tumor formation; however, becomes down-regulated upon the progression of gastric cancer. These findings suggest the potential of miR-584 as a diagnostic or prognostic biomarker in gastric cancer.

中文翻译:

miR-584在原发性和高级胃癌中的表达波动。

胃癌是全球第五大最常见的癌症。与环境因素(例如幽门螺杆菌(H. pylori)感染)一起,遗传变化在胃肿瘤形成中起重要作用。miR-584是特征性较差的microRNA(miRNA),在人类癌症中具有明显的活性。然而,miR-584在胃癌发展中的表达模式仍不清楚。这项研究旨在分析miR-584在胃癌样品中的表达,并研究该miRNA与幽门螺杆菌感染与临床特征之间的关系。使用RT-qPCR方法研究了miR-584在原发性胃癌与健康对照胃黏膜样品中的表达水平。根据miR-584表达对临床数据进行统计学分析。为了评估其表达并发现新的潜在靶标基因,使用了计算机研究来更广泛地研究miR-584。实验和计算机研究均显示胃癌患者中miR-584的上调。这种上调似乎是由幽门螺杆菌感染引起的,因为被感染的样品显示出增加的miR-584表达水平。更深入的分析显示,miR-584在晚期,侵袭性和淋巴结转移性胃肿瘤中经历了急剧的下调。生物信息学研究表明,miR-584在癌症途径中具有重要作用,并且具有靶向STAT1转录本的潜力。与miR-584的TCGA RNA-seq数据和STAT1转录本之间的逆相关性一致,qPCR分析显示一组临床样品中这两个RNA之间存在显着的负相关。miR-584在原发性肿瘤形成阶段经历上调;然而,随着胃癌的发展,它会被下调。这些发现表明miR-584作为胃癌诊断或预后生物标志物的潜力。
更新日期:2020-07-02
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